RNA–Protein interactions for RNA: ENST00000473405.1

CCDC88B-206, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best)

Gene CCDC88B, Length 783 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-206ENST00000473405 MBNL2Q5VZF2 373 aaKnown RBP15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 ZNF774Q6NX45 483 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 ZNF730Q6ZMV8 503 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 RNF113BQ8IZP6 322 aaKnown RBP15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 OR51F2Q8NH61 342 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 KLF14Q8TD94 323 aaPredicted RBP15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 LRRC37BQ96QE4 947 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 ZNF665Q9H7R5 613 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 PKD1L1Q8TDX9 2849 aa15.98■□□□□ 0.15
CCDC88B-206ENST00000473405 DEAF1O75398 565 aaPredicted RBP15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 ITGA2P17301 1181 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 MSR1P21757 451 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 PCBD1P61457 104 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 MOGQ16653 247 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 ZNF718Q3SXZ3 478 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 MESTQ5EB52 335 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 FAM209AQ5JX71 171 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 TMPRSS11FQ6ZWK6 438 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 FAM122BQ7Z309 247 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 ABHD4Q8TB40 342 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 HOPXQ9BPY8 73 aaPredicted RBP15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 POLE4Q9NR33 117 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 DECR2Q9NUI1 292 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 EIF3KQ9UBQ5 218 aaKnown RBP15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 TIMM10BQ9Y5J6 103 aa15.97■□□□□ 0.15
CCDC88B-206ENST00000473405 GSTA4O15217 222 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 CD14P08571 375 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 GCH1P30793 250 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 NUDT2P50583 147 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 PPP1CBP62140 327 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 TEKQ02763 1124 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 LIPNQ5VXI9 398 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 HACD2Q6Y1H2 254 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 FKBP9P1Q75LS8 142 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 SYT9Q86SS6 491 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 ALDH16A1Q8IZ83 802 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 SLC7A13Q8TCU3 470 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 Q96M85 177 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 ANKRD19PQ9H560 264 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 NMNAT1Q9HAN9 279 aaPredicted RBP15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 EMC7Q9NPA0 242 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 G6PC2Q9NQR9 355 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 ABCD2Q9UBJ2 740 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 GRIP1Q9Y3R0 1128 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 WIPI2Q9Y4P8 454 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 ENPP4Q9Y6X5 453 aa15.96■□□□□ 0.15
CCDC88B-206ENST00000473405 TRAV20A0A0B4J274 112 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 C12orf71A8MTZ7 269 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 CLDN25C9JDP6 229 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 H3BSA7 217 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 TPD52L2O43399 206 aaKnown RBP15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 SPRY3O43610 288 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 CCDC22O60826 627 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 IGHV2-5P01817 119 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 ADH4P08319 380 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 NCK1P16333 377 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 RPL4P36578 427 aaKnown RBP15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 MDH1P40925 334 aaKnown RBP15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 HFEQ30201 348 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 ZBED5Q49AG3 693 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 UNQ6126/PRO20091Q6UXV3 157 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 C1orf229Q6ZS94 237 aaPredicted RBP15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 C1orf174Q8IYL3 243 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 C4orf45Q96LM5 186 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 METTL17Q9H7H0 456 aaPredicted RBP15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 EFCAB1Q9HAE3 211 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 GRHPRQ9UBQ7 328 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 KLHL21Q9UJP4 597 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 ARHGAP32A7KAX9 2087 aa15.95■□□□□ 0.14
CCDC88B-206ENST00000473405 PLSCR5A0PG75 271 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 UBOX5O94941 541 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 PNPP00491 289 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 CTLA4P16410 223 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 GUCA1AP43080 201 aaPredicted RBP15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 LIMS1P48059 325 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 HNRNPA0Q13151 305 aaKnown RBP15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 SPRNQ5BIV9 151 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 SEMA6DQ8NFY4 1073 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 FAM162AQ96A26 154 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 RASD2Q96D21 266 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 ELMOD3Q96FG2 381 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 FAM46AQ96IP4 442 aaKnown RBP15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 KCTD14Q9BQ13 255 aaPredicted RBP15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 POFUT1Q9H488 388 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 CGGBP1Q9UFW8 167 aaPredicted RBP15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 METRNQ9UJH8 293 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 NDRG4Q9ULP0 352 aaKnown RBP15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 SIGLEC7Q9Y286 467 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 DYSFO75923 2080 aa15.94■□□□□ 0.14
CCDC88B-206ENST00000473405 TEX13CA0A0J9YWL9 993 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 A0A1W2PRQ8 180 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 PRSS37A4D1T9 235 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 AVPP01185 164 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 FXYD6P3P58550 94 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 DGCR6Q14129 220 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 ACSM5Q6NUN0 579 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 CYP4Z1Q86W10 505 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 FAM86B1Q8N7N1 296 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 RAB39BQ96DA2 213 aa15.93■□□□□ 0.14
CCDC88B-206ENST00000473405 ZNF570Q96NI8 536 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms