RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 CCNA1P78396 465 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 TWF1Q12792 350 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 TCEAL5Q5H9L2 206 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 AVPI1Q5T686 147 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 PYHIN1Q6K0P9 492 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 SLC35G3Q8N808 338 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 OR6N1Q8NGY5 312 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 MAGEE2Q8TD90 523 aaPredicted RBP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 OSTF1Q92882 214 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 TCEAL3Q969E4 200 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 TBRG4Q969Z0 631 aaKnown RBP eCLIP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 ZBED3Q96IU2 234 aaPredicted RBP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 NPY6RQ99463 290 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 FAIM2Q9BWQ8 316 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 KRT23Q9C075 422 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 HSD3B7Q9H2F3 369 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 ZSCAN16Q9H4T2 348 aaPredicted RBP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 EDA2RQ9HAV5 297 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 UFSP2Q9NUQ7 469 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 RHBDL2Q9NX52 303 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 PIPOXQ9P0Z9 390 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 RNF14Q9UBS8 474 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 YARS2Q9Y2Z4 477 aaKnown RBP0.56□□□□□ -2.32
COMMD3-209ENST00000471350 MEMO1Q9Y316 297 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 ZBED9Q6R2W3 1325 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 SORL1Q92673 2214 aa0.56□□□□□ -2.32
COMMD3-209ENST00000471350 IGHV1-3A0A0C4DH29 117 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 KRT87PA6NCN2 255 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 TRIM64A6NGJ6 449 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 TRIM64BA6NI03 449 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 FCMRO60667 390 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 CCDC22O60826 627 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 SURF6O75683 361 aaKnown RBP0.55□□□□□ -2.32
COMMD3-209ENST00000471350 PAHP00439 452 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 LHBP01229 141 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 MT-ND3P03897 115 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 IGLV7-43P04211 117 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 PRB1P04280 392 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF250P15622 560 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 RAB3AP20336 220 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 F2RP25116 425 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 PPT1P50897 306 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 CCNG1P51959 295 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 CDK5Q00535 292 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 MRPL28Q13084 256 aaKnown RBP0.55□□□□□ -2.32
COMMD3-209ENST00000471350 RNASE13Q5GAN3 156 aaKnown RBP0.55□□□□□ -2.32
COMMD3-209ENST00000471350 TEX30Q5JUR7 227 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 STUMQ69YW2 141 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 GUSBP11Q6P575 273 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 PRSS54Q6PEW0 395 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 FBXW12Q6X9E4 464 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 MRGPRFQ96AM1 343 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 GALNT14Q96FL9 552 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 TMEM237Q96Q45 408 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF649Q9BS31 505 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 FGF23Q9GZV9 251 aaPredicted RBP0.55□□□□□ -2.32
COMMD3-209ENST00000471350 C1orf21Q9H246 121 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 C8orf17Q9NRJ1 99 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 ASF1BQ9NVP2 202 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 COL5A3P25940 1745 aaPredicted RBP0.55□□□□□ -2.32
COMMD3-209ENST00000471350 MUC16Q8WXI7 14507 aa0.55□□□□□ -2.32
COMMD3-209ENST00000471350 BAHCC1Q9P281 2608 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 NACADO15069 1562 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 SCN1AP35498 2009 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 IGHV3-49A0A0A0MS15 119 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 GPR89AB7ZAQ6 455 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 C3orf84H3BNL1 204 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CDC40O60508 579 aaKnown RBP eCLIP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CNMDO75829 334 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 IDH1O75874 414 aaKnown RBP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 OR7A10O76100 309 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 AK1P00568 194 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 IGLV3-25P01717 112 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 HEXBP07686 556 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 GPR89BP0CG08 455 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 ZNF35P13682 527 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 ATP6V1C1P21283 382 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 FUSP35637 526 aaKnown RBP eCLIP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 HCAR3P49019 387 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CAMLGP49069 296 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 FBXW4P57775 412 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 PPP1CBP62140 327 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 PPIDQ08752 370 aaKnown RBP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 ECH1Q13011 328 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 SP6Q3SY56 376 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CPTPQ5TA50 214 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 H3F3CQ6NXT2 135 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 MED27Q6P2C8 311 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 LRRC74BQ6ZQY2 392 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CCDC73Q6ZRK6 1079 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 TMPPEQ6ZT21 453 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 TCF24Q7RTU0 167 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CDR2LQ86X02 465 aaPredicted RBP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 TMEM123Q8N131 208 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 GTPBP8Q8N3Z3 284 aaPredicted RBP0.54□□□□□ -2.32
COMMD3-209ENST00000471350 ANKFN1Q8N957 763 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 LRRC75AQ8NAA5 344 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 OR10R2Q8NGX6 335 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 OR10J6PQ8NGY7 276 aa0.54□□□□□ -2.32
COMMD3-209ENST00000471350 CCDC110Q8TBZ0 833 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms