RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 SYT9Q86SS6 491 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 OAFQ86UD1 273 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 NRMQ8IXM6 262 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 OFCC1Q8IZS5 231 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 CLDN22Q8N7P3 220 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 LRRC75AQ8NAA5 344 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 OR51A7Q8NH64 312 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 ABHD4Q8TB40 342 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 CCL17Q92583 94 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 DIRC2Q96SL1 478 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 WACQ9BTA9 647 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 FNDC11Q9BVV2 318 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 ELOVL3Q9HB03 270 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 FGFR1OP2Q9NVK5 253 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 ZDHHC8Q9ULC8 765 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 PCDHB10Q9UN67 800 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 TANC2Q9HCD6 1990 aa14.85□□□□□ -0.03
COL7A1-208ENST00000470076 LOC105371242A0A075B767 164 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 A0A1W2PPL8 197 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 ZSCAN5BA6NJL1 495 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 C12orf71A8MTZ7 269 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 SLC22A2O15244 555 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 UBOX5O94941 541 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 IFNW1P05000 195 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 MSR1P21757 451 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 GATA3P23771 443 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 SLC9A3P48764 834 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 ARHGDIAP52565 204 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 PRKCDQ05655 676 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 TMEM255AQ5JRV8 349 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 ARPINQ7Z6K5 226 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 IGFN1Q86VF2 1251 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 RNF113BQ8IZP6 322 aaKnown RBP14.84□□□□□ -0.03
COL7A1-208ENST00000470076 C4orf45Q96LM5 186 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 GAL3ST1Q99999 423 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 TMPRSS13Q9BYE2 586 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 MAN2C1Q9NTJ4 1040 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 KLHL21Q9UJP4 597 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 NDRG4Q9ULP0 352 aaKnown RBP14.84□□□□□ -0.03
COL7A1-208ENST00000470076 CAPN7Q9Y6W3 813 aa14.84□□□□□ -0.03
COL7A1-208ENST00000470076 TRAV27A0A087WT01 109 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 EFCAB9A8MZ26 197 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 NGFP01138 241 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 AVPP01185 164 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 YAP1P46937 504 aaKnown RBP14.83□□□□□ -0.04
COL7A1-208ENST00000470076 HILS1P60008 231 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 FHL1Q13642 323 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 ENDOGQ14249 297 aaKnown RBP14.83□□□□□ -0.04
COL7A1-208ENST00000470076 DCAF12L2Q5VW00 463 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 CGB2Q6NT52 195 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 ZNF774Q6NX45 483 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 C1QL2Q7Z5L3 287 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 ZER1Q7Z7L7 766 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 PEG10Q86TG7 708 aaKnown RBP14.83□□□□□ -0.04
COL7A1-208ENST00000470076 GEMIN6Q8WXD5 167 aaKnown RBP14.83□□□□□ -0.04
COL7A1-208ENST00000470076 ACOT11Q8WXI4 607 aaPredicted RBP14.83□□□□□ -0.04
COL7A1-208ENST00000470076 JMJD8Q96S16 334 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 RHCGQ9UBD6 479 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 SNX13Q9Y5W8 968 aa14.83□□□□□ -0.04
COL7A1-208ENST00000470076 FFAR1O14842 300 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 SASH3O75995 380 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 CD55P08174 381 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 COX5BP10606 129 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 FUT4P22083 530 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 TUBG1P23258 451 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 SF3A3Q12874 501 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL7A1-208ENST00000470076 VTCN1Q7Z7D3 282 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 FAM156AQ8NDB6 213 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 OR13C2Q8NGS9 318 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 RCN3Q96D15 328 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 POLE4Q9NR33 117 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 TUBG2Q9NRH3 451 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 CMTM6Q9NX76 183 aa14.82□□□□□ -0.04
COL7A1-208ENST00000470076 ARHGAP32A7KAX9 2087 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 A0A087WUU8 490 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 ISPDA4D126 451 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 TRIM77I1YAP6 450 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 J3KTA2 159 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 AHCYL1O43865 530 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 RGS9O75916 674 aaPredicted RBP14.81□□□□□ -0.04
COL7A1-208ENST00000470076 ZNF682O95780 498 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 GSTM3P21266 225 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 CFPP27918 469 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 RPL4P36578 427 aaKnown RBP14.81□□□□□ -0.04
COL7A1-208ENST00000470076 ACTG1P63261 375 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 SCRN3Q0VDG4 424 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 IFI44LQ53G44 452 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 MTX3Q5HYI7 312 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 ZNF730Q6ZMV8 503 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 TMPRSS11FQ6ZWK6 438 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 MBOAT2Q6ZWT7 520 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 TREML1Q86YW5 311 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 SLC15A3Q8IY34 581 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 NPEPL1Q8NDH3 523 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 RP9Q8TA86 221 aaKnown RBP14.81□□□□□ -0.04
COL7A1-208ENST00000470076 NANPQ8TBE9 248 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 FAM216AQ8WUB2 273 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 SUCNR1Q9BXA5 334 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 NDEL1Q9GZM8 345 aa14.81□□□□□ -0.04
COL7A1-208ENST00000470076 MSL2Q9HCI7 577 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms