RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 RNFT1Q5M7Z0 435 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 IGFL2Q6UWQ7 119 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 BTLAQ7Z6A9 289 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 MEIOBQ8N635 442 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 OR5AK2Q8NH90 309 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 ABTB1Q969K4 478 aaPredicted RBP16.08■□□□□ 0.16
SMC4-211ENST00000469858 TMEM54Q969K7 222 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 PNPLA2Q96AD5 504 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 MAP6Q96JE9 813 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 DEFB127Q9H1M4 99 aa16.08■□□□□ 0.16
SMC4-211ENST00000469858 IQCMA0A1B0GVH7 501 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 RASGEF1BQ0VAM2 473 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 YIF1BQ5BJH7 314 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 ABHD3Q8WU67 409 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 RGP1Q92546 391 aaPredicted RBP16.07■□□□□ 0.16
SMC4-211ENST00000469858 LDAHQ9H6V9 325 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 ACKR4Q9NPB9 350 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 GTF2A1LQ9UNN4 478 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 TNRC6AQ8NDV7 1962 aaKnown RBP16.07■□□□□ 0.16
SMC4-211ENST00000469858 CYTIPO60759 359 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 ODF4Q2M2E3 257 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 C16orf87Q6PH81 154 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 PAMR1Q6UXH9 720 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 PRSS35Q8N3Z0 413 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 RNF128Q8TEB7 428 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 EXO5Q9H790 373 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 CENPMQ9NSP4 180 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 CYB5R1Q9UHQ9 305 aa16.07■□□□□ 0.16
SMC4-211ENST00000469858 DCHS1Q96JQ0 3298 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 SPTBN2O15020 2390 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 GATBO75879 557 aaKnown RBP16.06■□□□□ 0.16
SMC4-211ENST00000469858 WDR38Q5JTN6 314 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 PLXDC2Q6UX71 529 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 CEP19Q96LK0 163 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 C4orf45Q96LM5 186 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 DCBLD2Q96PD2 775 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 SCNM1Q9BWG6 230 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 ULBP2Q9BZM5 246 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 COMMD4Q9H0A8 199 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 FOXD3Q9UJU5 478 aaPredicted RBP16.06■□□□□ 0.16
SMC4-211ENST00000469858 FBXL3Q9UKT7 428 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 UGT2A1Q9Y4X1 527 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 LHFPL6Q9Y693 200 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 CFAP47Q6ZTR5 3102 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 ACOD1A6NK06 481 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 OR4C45A6NMZ5 311 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 CEACAM4O75871 244 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 PNPP00491 289 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 NTF4P34130 210 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 MAGEB1P43366 347 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 KIR3DL2P43630 455 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 MFGE8Q08431 387 aaPredicted RBP16.06■□□□□ 0.16
SMC4-211ENST00000469858 C3AR1Q16581 482 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 C10orf128Q5T292 105 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 NR2C2APQ86WQ0 139 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 C20orf196Q8IYI0 205 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 ZNF676Q8N7Q3 588 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 AP3S1Q92572 193 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 C1orf198Q9H425 327 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 POLE4Q9NR33 117 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 RCE1Q9Y256 329 aa16.06■□□□□ 0.16
SMC4-211ENST00000469858 TMEM212A6NML5 194 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 ZNF879B4DU55 563 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 ARL6IP5O75915 188 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 ACTL6AO96019 429 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 UCHL1P09936 223 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 FDX2Q6P4F2 183 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 CFAP77Q6ZQR2 320 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 AAED1Q7RTV5 226 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 LAX1Q8IWV1 398 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 TEX19Q8NA77 164 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 OR2AJ1Q8NGZ0 328 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 RNF133Q8WVZ7 376 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 INTS12Q96CB8 462 aaKnown RBP16.05■□□□□ 0.16
SMC4-211ENST00000469858 SLAMF6Q96DU3 332 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 RBM24Q9BX46 236 aaKnown RBP16.05■□□□□ 0.16
SMC4-211ENST00000469858 ASH2LQ9UBL3 628 aa16.05■□□□□ 0.16
SMC4-211ENST00000469858 GDF2Q9UK05 429 aaPredicted RBP16.05■□□□□ 0.16
SMC4-211ENST00000469858 TRGV5A0A0B4J1U4 118 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 TRAV17A0A0B4J275 112 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 H3BSH0 61 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 TFECO14948 347 aaPredicted RBP16.04■□□□□ 0.16
SMC4-211ENST00000469858 DHHO43323 396 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 SLC43A1O75387 559 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 SYNGR4O95473 234 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 H2BFMP0C1H6 154 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 GUCA1AP43080 201 aaPredicted RBP16.04■□□□□ 0.16
SMC4-211ENST00000469858 ZNF133P52736 654 aaPredicted RBP16.04■□□□□ 0.16
SMC4-211ENST00000469858 OR10A3P58181 314 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 SGCAQ16586 387 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.04■□□□□ 0.16
SMC4-211ENST00000469858 CROCCP3Q8IVE0 287 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 RDH10Q8IZV5 341 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 ORAI1Q96D31 301 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 ZDHHC11Q9H8X9 412 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 NOX4Q9NPH5 578 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 SLC22A13Q9Y226 551 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 CMAHPQ9Y471 501 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 ZNF254O75437 659 aa16.04■□□□□ 0.16
SMC4-211ENST00000469858 BCL2A1Q16548 175 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms