RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 YAP1P46937 504 aaKnown RBP10.34□□□□□ -0.75
HDAC3-204ENST00000469207 ERFP50548 548 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 CTXN1P60606 82 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 LCN6P62502 163 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 TNFAIP6P98066 277 aaPredicted RBP10.34□□□□□ -0.75
HDAC3-204ENST00000469207 SF3A3Q12874 501 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC3-204ENST00000469207 ENDOGQ14249 297 aaKnown RBP10.34□□□□□ -0.75
HDAC3-204ENST00000469207 ALG10Q5BKT4 473 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 INTS11Q5TA45 600 aaKnown RBP10.34□□□□□ -0.75
HDAC3-204ENST00000469207 Q6ZR03 302 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 SLC30A8Q8IWU4 369 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 LRRC75AQ8NAA5 344 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 OR51A7Q8NH64 312 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 LIPHQ8WWY8 451 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 SLC7A6Q92536 515 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 RBP7Q96R05 134 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 ZNF747Q9BV97 191 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 EGLN1Q9GZT9 426 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 EMC7Q9NPA0 242 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 TMEM106BQ9NUM4 274 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 RHCGQ9UBD6 479 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 PURGQ9UJV8 347 aaKnown RBP10.34□□□□□ -0.75
HDAC3-204ENST00000469207 MED31Q9Y3C7 131 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 TIMM10BQ9Y5J6 103 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 SNX13Q9Y5W8 968 aa10.34□□□□□ -0.75
HDAC3-204ENST00000469207 TRAV27A0A087WT01 109 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 TIMM8AO60220 97 aaPredicted RBP10.33□□□□□ -0.76
HDAC3-204ENST00000469207 OR5F1O95221 314 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 ADH4P08319 380 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 CST2P09228 141 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 IFI30P13284 250 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 GATA3P23771 443 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 RBM34P42696 430 aaKnown RBP10.33□□□□□ -0.76
HDAC3-204ENST00000469207 SLC6A9P48067 706 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 RPL27P61353 136 aaKnown RBP10.33□□□□□ -0.76
HDAC3-204ENST00000469207 ZNF154Q13106 437 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 CDK5R2Q13319 367 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 FHL1Q13642 323 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 TAF11Q15544 211 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 TUSC1Q2TAM9 212 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 MTX3Q5HYI7 312 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 CALHM3Q86XJ0 350 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 TREML1Q86YW5 311 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 ALDH16A1Q8IZ83 802 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 OR2Z1Q8NG97 314 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 RASSF5Q8WWW0 418 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 ATP6V1G3Q96LB4 118 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 ZNF583Q96ND8 569 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 SMURF2Q9HAU4 748 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 NTN4Q9HB63 628 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 PATZ1Q9HBE1 687 aaKnown RBP10.33□□□□□ -0.76
HDAC3-204ENST00000469207 GMPR2Q9P2T1 348 aaKnown RBP10.33□□□□□ -0.76
HDAC3-204ENST00000469207 ZDHHC8Q9ULC8 765 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 A4GNTQ9UNA3 340 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 HIF3AQ9Y2N7 669 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 STARD10Q9Y365 291 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 AUP1Q9Y679 476 aa10.33□□□□□ -0.76
HDAC3-204ENST00000469207 A0A0G2JND7 137 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 IGHV3-64DA0A0J9YX35 117 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 DNAJC9-AS1A6NH13 148 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 J3KTA2 159 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 IMPA2O14732 288 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 FOXH1O75593 365 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 CD55P08174 381 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 PRTN3P24158 256 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 SLC3A1Q07837 685 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 BAMBIQ13145 260 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 CYLC2Q14093 348 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-204ENST00000469207 ZMYND11Q15326 602 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 PRR31Q5SQ13 230 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 C1orf94Q6P1W5 598 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 DOK3Q7L591 496 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 LRRC28Q86X40 367 aaPredicted RBP10.32□□□□□ -0.76
HDAC3-204ENST00000469207 C10orf82Q8WW14 230 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 ITLN1Q8WWA0 313 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 CMBLQ96DG6 245 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 BPIFA2Q96DR5 249 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 TPD52L3Q96J77 140 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 SIGLEC11Q96RL6 698 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 ECSITQ9BQ95 431 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 CYSLTR2Q9NS75 346 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 NUP50Q9UKX7 468 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 BAG5Q9UL15 447 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 INSIG2Q9Y5U4 225 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 TANC2Q9HCD6 1990 aa10.32□□□□□ -0.76
HDAC3-204ENST00000469207 FXYD1O00168 92 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 GPANK1O95872 356 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 IGF2P01344 180 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 IGHMP01871 453 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 IGHV4-38-2P0DP08 117 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 ZNF12P17014 697 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 CD80P33681 288 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 LIPAP38571 399 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 FOXL1Q12952 345 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 LRRC23Q53EV4 343 aaPredicted RBP10.31□□□□□ -0.76
HDAC3-204ENST00000469207 CYBRD1Q53TN4 286 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 ARMCX4Q5H9R4 360 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 TBPL2Q6SJ96 375 aa10.31□□□□□ -0.76
HDAC3-204ENST00000469207 RBMS3Q6XE24 437 aaKnown RBP10.31□□□□□ -0.76
HDAC3-204ENST00000469207 FOXL2NBQ6ZUU3 175 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms