RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 TMEM54Q969K7 222 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 RNF185Q96GF1 192 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 PRO0461Q9UI25 63 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 LSM7Q9UK45 103 aaKnown RBP3.35□□□□□ -1.87
LSM5-209ENST00000468872 HEBP2Q9Y5Z4 205 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 SYNRGQ9UMZ2 1314 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 CDC42BPBQ9Y5S2 1711 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 KIAA0232Q92628 1395 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 TNS3Q68CZ2 1445 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 ASPMQ8IZT6 3477 aa3.35□□□□□ -1.87
LSM5-209ENST00000468872 CDH23Q9H251 3354 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 HELZ2Q9BYK8 2649 aaKnown RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 QRICH2Q9H0J4 1663 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 XRN1Q8IZH2 1706 aaKnown RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 N4BP2Q86UW6 1770 aaPredicted RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 A6NDX4 124 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 PEX7O00628 323 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 DLGAP1O14490 977 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 DFNA5O60443 496 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 EIF3GO75821 320 aaKnown RBP eCLIP3.34□□□□□ -1.87
LSM5-209ENST00000468872 IGHV3-43DP0DP04 118 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 TOP1P11387 765 aaKnown RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 NR2C1P13056 603 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 CCNCP24863 283 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 SLC26A3P40879 764 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 RPS10P46783 165 aaKnown RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 RORCP51449 518 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 CCNHP51946 323 aaPredicted RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 ZNF133P52736 654 aaPredicted RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 CRISP3P54108 245 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 UGT2B15P54855 530 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 AQP6Q13520 282 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 GUCA2BQ16661 112 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 RFX4Q33E94 735 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 RAET1LQ5VY80 246 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 CARD17Q5XLA6 110 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 ZNF530Q6P9A1 599 aaPredicted RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 RNF175Q8N4F7 328 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 ZNF433Q8N7K0 673 aaPredicted RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 Q8N9W7 124 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 OR7G2Q8NG99 324 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 DTX3LQ8TDB6 740 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 BLOC1S5Q8TDH9 187 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 PIBF1Q8WXW3 757 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 TMEM158Q8WZ71 300 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 ATP5SQ99766 215 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 FAM192AQ9GZU8 254 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 RACGAP1Q9H0H5 632 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 DNTTIP1Q9H147 329 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 FGF20Q9NP95 211 aaPredicted RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 SLCO1B3Q9NPD5 702 aa3.34□□□□□ -1.87
LSM5-209ENST00000468872 F11RQ9Y624 299 aaKnown RBP3.34□□□□□ -1.87
LSM5-209ENST00000468872 HECTD1Q9ULT8 2610 aa3.34□□□□□ -1.88
LSM5-209ENST00000468872 TDRD6O60522 2096 aaKnown RBP3.34□□□□□ -1.88
LSM5-209ENST00000468872 PTPRZ1P23471 2315 aaPredicted RBP3.33□□□□□ -1.88
LSM5-209ENST00000468872 SPEGQ15772 3267 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 TCP11X1B4DZS4 312 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 DNALI1O14645 258 aaPredicted RBP3.33□□□□□ -1.88
LSM5-209ENST00000468872 RAB29O14966 203 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 CLOCKO15516 846 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 AGTP01019 485 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 FOLR1P15328 257 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 CNR1P21554 472 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 LHX2P50458 406 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 CCR8P51685 355 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 RCN1Q15293 331 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 MPPED2Q15777 294 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 ALKBH6Q3KRA9 238 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 LY6G6FQ5SQ64 297 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 ZNF429Q86V71 674 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 EID2Q8N6I1 236 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 FBXL13Q8NEE6 735 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 OR6X1Q8NH79 312 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 MCOLN3Q8TDD5 553 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 ACMSDQ8TDX5 336 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 AURKBQ96GD4 344 aaPredicted RBP3.33□□□□□ -1.88
LSM5-209ENST00000468872 NEUROG2Q9H2A3 272 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 VPS37BQ9H9H4 285 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 ZNF331Q9NQX6 463 aaPredicted RBP3.33□□□□□ -1.88
LSM5-209ENST00000468872 DEC1Q9P2X7 70 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 RABL2AQ9UBK7 228 aaPredicted RBP3.33□□□□□ -1.88
LSM5-209ENST00000468872 NUFIP1Q9UHK0 495 aaKnown RBP3.33□□□□□ -1.88
LSM5-209ENST00000468872 CLIP1P30622 1438 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 KNDC1Q76NI1 1749 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 SCN11AQ9UI33 1791 aa3.33□□□□□ -1.88
LSM5-209ENST00000468872 FAM166BA8MTA8 275 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 C9JVG2 144 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 DYNC1I1O14576 645 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 OR2J3O76001 311 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 FTH1P02794 183 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 ANXA5P08758 320 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 MDKP21741 143 aaPredicted RBP3.32□□□□□ -1.88
LSM5-209ENST00000468872 CDKN1BP46527 198 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 RFX3P48380 749 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 TMED10P49755 219 aaKnown RBP3.32□□□□□ -1.88
LSM5-209ENST00000468872 NCBP2P52298 156 aaKnown RBP eCLIP3.32□□□□□ -1.88
LSM5-209ENST00000468872 PRRX1P54821 245 aa3.32□□□□□ -1.88
LSM5-209ENST00000468872 YWHAGP61981 247 aaKnown RBP eCLIP3.32□□□□□ -1.88
LSM5-209ENST00000468872 RPS21P63220 83 aaKnown RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms