RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 ABHD1Q96SE0 405 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 AMELYQ99218 206 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 GFI1Q99684 422 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 THAP7Q9BT49 309 aaPredicted RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 TRAF4Q9BUZ4 470 aaPredicted RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 C1orf198Q9H425 327 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 SMOC1Q9H4F8 434 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 RNF121Q9H920 327 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 BRD7Q9NPI1 651 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 B3GAT2Q9NPZ5 323 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM9BQ9NQ34 198 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 COPZ2Q9P299 210 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 AK6Q9Y3D8 172 aaKnown RBP6.79□□□□□ -1.32
COL6A3-208ENST00000468792 LRP12Q9Y561 859 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 WDFY4Q6ZS81 3184 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 GPR179Q6PRD1 2367 aa6.79□□□□□ -1.32
COL6A3-208ENST00000468792 A0A0A6YYH2 397 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 TEX51A0A1B0GUA7 166 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 MEIOCA2RUB1 952 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 OR2M5A3KFT3 312 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 HMX3A6NHT5 357 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 A6NJ64 397 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF726A6NNF4 738 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 CENPXA8MT69 81 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.78□□□□□ -1.32
COL6A3-208ENST00000468792 PSMD9O00233 223 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 PAHP00439 452 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 PNPP00491 289 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 P04436 131 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 ADRA2CP18825 462 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 KIR2DL3P43628 341 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 CLDN20P56880 219 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 CLRN1P58418 232 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 B3GALT5-AS1P59052 145 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 RAC3P60763 192 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 Q0VFX4 171 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 INPP5JQ15735 1006 aaPredicted RBP6.78□□□□□ -1.32
COL6A3-208ENST00000468792 BRICD5Q6PL45 260 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 PLET1Q6UQ28 207 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 CREB3L2Q70SY1 520 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 AKAP14Q86UN6 197 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 CDH26Q8IXH8 852 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 KDM8Q8N371 416 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 CCDC54Q8NEL0 328 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 OR10H5Q8NGA6 315 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 OR5H6Q8NGV6 325 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 ZNF671Q8TAW3 534 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 ENKURQ8TC29 256 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 ADAMTS17Q8TE56 1095 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 SMIM4Q8WVI0 70 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 ASB5Q8WWX0 329 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 C11orf40Q8WZ69 217 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 PSMF1Q92530 271 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 TMEM54Q969K7 222 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 YIPF5Q969M3 257 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 FOXRED1Q96CU9 486 aaPredicted RBP6.78□□□□□ -1.32
COL6A3-208ENST00000468792 S100A16Q96FQ6 103 aaKnown RBP6.78□□□□□ -1.32
COL6A3-208ENST00000468792 NEDD4LQ96PU5 975 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 TTTY10Q9BZA0 68 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 OR2B2Q9GZK3 357 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 G6PC2Q9NQR9 355 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 MED29Q9NX70 200 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 P4HTMQ9NXG6 502 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 CKLFQ9UBR5 152 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 STEAP1Q9UHE8 339 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 HHLA2Q9UM44 414 aa6.78□□□□□ -1.32
COL6A3-208ENST00000468792 RBMX2Q9Y388 322 aaKnown RBP6.78□□□□□ -1.32
COL6A3-208ENST00000468792 FREM3P0C091 2139 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 KIF26BQ2KJY2 2108 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 IGKV1D-43A0A0B4J1Z2 117 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 FAM240BA0A1B0GVZ2 78 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 TMEM269A0A1B0GVZ9 245 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 A0A1W2PNR3 127 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 A0A1W2PPK0 400 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 LOC390937A0A1W2PQ73 354 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 NAP1L6A6NFF2 107 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 SHISA8B8ZZ34 492 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 GABARAPH6UMI1 98 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 SLC17A2O00624 439 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 ORC5O43913 435 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 GPANK1O95872 356 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 ECDO95905 644 aaPredicted RBP6.77□□□□□ -1.33
COL6A3-208ENST00000468792 H2BFMP0C1H6 154 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 SNRPBP14678 240 aaKnown RBP6.77□□□□□ -1.33
COL6A3-208ENST00000468792 CNR1P21554 472 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 OTX2P32243 289 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 DDOSTP39656 456 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 INPP1P49441 399 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 CYB561P49447 251 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 ART1P52961 327 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 AP3S2P59780 193 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 HIST1H3AP68431 136 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 SSBP1Q04837 148 aaKnown RBP6.77□□□□□ -1.33
COL6A3-208ENST00000468792 STK11Q15831 433 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 SLC36A2Q495M3 483 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 PLA1AQ53H76 456 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 HIST2H3PS2Q5TEC6 136 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 PRAMEF20Q5VT98 475 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 GLT8D1Q68CQ7 371 aa6.77□□□□□ -1.33
COL6A3-208ENST00000468792 LRRC69Q6ZNQ3 347 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms