RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 HIPK1Q86Z02 1210 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 ALDH16A1Q8IZ83 802 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 NSL1Q96IY1 281 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 ZNF416Q9BWM5 594 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 TAAR3PQ9P1P4 343 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 IL20RAQ9UHF4 553 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 GPR160Q9UJ42 338 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 IER3IP1Q9Y5U9 82 aa14.65□□□□□ -0.06
SSBP1-207ENST00000468267 C5orf49A4QMS7 147 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 LYNX1G3V0Z9 82 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 TXNDC12O95881 172 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 FAM107AO95990 144 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 FABP3P05413 133 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 LYNX1P0DP58 116 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 NAT2P11245 290 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 APEHP13798 732 aaKnown RBP14.64□□□□□ -0.07
SSBP1-207ENST00000468267 CTLA4P16410 223 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 ZNF23P17027 643 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 WNT5AP41221 380 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 NKPD1Q17RQ9 610 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 ELFN2Q5R3F8 820 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 SMARCD3Q6STE5 483 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 UGT2A3Q6UWM9 527 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 OR1J1Q8NGS3 322 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 WACQ9BTA9 647 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 EMC7Q9NPA0 242 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 SLCO1C1Q9NYB5 712 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 VSX1Q9NZR4 365 aaPredicted RBP14.64□□□□□ -0.07
SSBP1-207ENST00000468267 ACTR3BQ9P1U1 418 aa14.64□□□□□ -0.07
SSBP1-207ENST00000468267 EIF3KQ9UBQ5 218 aaKnown RBP14.64□□□□□ -0.07
SSBP1-207ENST00000468267 SOCS2O14508 198 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 HPXP02790 462 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 TACSTD2P09758 323 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 RRM2P31350 389 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 RPS6KA3P51812 740 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 ALKBH6Q3KRA9 238 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 ZNF774Q6NX45 483 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 ADCK1Q86TW2 530 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 ZDHHC21Q8IVQ6 265 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 ZNF101Q8IZC7 436 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 ARHGAP24Q8N264 748 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 CCDC197Q8NCU1 140 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 ICA1LQ8NDH6 482 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 KRTAP3-3Q9BYR6 98 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 KRTAP3-2Q9BYR7 98 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 HINT3Q9NQE9 182 aaKnown RBP14.63□□□□□ -0.07
SSBP1-207ENST00000468267 TMCC3Q9ULS5 477 aa14.63□□□□□ -0.07
SSBP1-207ENST00000468267 KIAA1324LA8MWY0 1029 aaPredicted RBP14.62□□□□□ -0.07
SSBP1-207ENST00000468267 OR10H3O60404 316 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 SLC16A7O60669 478 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 ICMTO60725 284 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 LILRA1O75019 489 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 KHDRBS3O75525 346 aaKnown RBP14.62□□□□□ -0.07
SSBP1-207ENST00000468267 IGHV3-13P01766 116 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 ZNF16P17020 682 aaPredicted RBP14.62□□□□□ -0.07
SSBP1-207ENST00000468267 COL8A2P25067 703 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 FPR3P25089 353 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 CDKN2AP42771 156 aaKnown RBP14.62□□□□□ -0.07
SSBP1-207ENST00000468267 MOGQ16653 247 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 RFX4Q33E94 735 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 ZNF718Q3SXZ3 478 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 UNQ6126/PRO20091Q6UXV3 157 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 CYP2R1Q6VVX0 501 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 PTCHD4Q6ZW05 846 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 GLB1L2Q8IW92 636 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 C1orf174Q8IYL3 243 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 FANK1Q8TC84 345 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 RDH5Q92781 318 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 MSI2Q96DH6 328 aaKnown RBP14.62□□□□□ -0.07
SSBP1-207ENST00000468267 SYT4Q9H2B2 425 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 TMEM160Q9NX00 188 aa14.62□□□□□ -0.07
SSBP1-207ENST00000468267 DNHD1Q96M86 4753 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 C17orf100A8MU93 164 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 IMPA2O14732 288 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 KRT36O76013 467 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 NCR1O76036 304 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 T-ENOLP0DO92 83 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 COX5BP10606 129 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 ATP6V1B2P21281 511 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 IFNGR2P38484 337 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 GSSP48637 474 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 CHN2P52757 468 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 HMGA2P52926 109 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 MRPS11P82912 194 aaKnown RBP14.61□□□□□ -0.07
SSBP1-207ENST00000468267 SCRN3Q0VDG4 424 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 CHRFAM7AQ494W8 412 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 MTX3Q5HYI7 312 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 C1orf94Q6P1W5 598 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 TMEM154Q6P9G4 183 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 SNX33Q8WV41 574 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 MARS2Q96GW9 593 aaKnown RBP14.61□□□□□ -0.07
SSBP1-207ENST00000468267 ERMAPQ96PL5 475 aaPredicted RBP14.61□□□□□ -0.07
SSBP1-207ENST00000468267 NUAK2Q9H093 628 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 RERGLQ9H628 205 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 CHODLQ9H9P2 273 aa14.61□□□□□ -0.07
SSBP1-207ENST00000468267 COA3Q9Y2R0 106 aaPredicted RBP14.61□□□□□ -0.07
SSBP1-207ENST00000468267 LOC100289279A0A1B0GTE1 492 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 LRP5LA4QPB2 252 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 MPZL1O95297 269 aa14.6□□□□□ -0.07
SSBP1-207ENST00000468267 PPP1R3DO95685 299 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms