RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 EXOSC1Q9Y3B2 195 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 SNRNP200O75643 2136 aaKnown RBP2.24□□□□□ -2.05
XRN1-206ENST00000467077 SPTBP11277 2137 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 SCN2AQ99250 2005 aa2.24□□□□□ -2.05
XRN1-206ENST00000467077 RP1L1Q8IWN7 2480 aaPredicted RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 PKDREJQ9NTG1 2253 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 TRAV17A0A0B4J275 112 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 A0A0J9YYE9 177 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 NKX2-6A6NCS4 301 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 FAM231BA6NCW3 169 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 WASHC1A8K0Z3 465 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 GPR89AB7ZAQ6 455 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PANO1I0J062 215 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 CASKO14936 926 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 TM9SF1O15321 606 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PPIHO43447 177 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 LANCL1O43813 399 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 MTX2O75431 263 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 SCGB2A1O75556 95 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 OR2B3O76000 313 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 CDK14O94921 469 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 SMC2O95347 1197 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 LSM8O95777 96 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 GNA14O95837 355 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 TSPAN12O95859 305 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 TRBC1P01850 177 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 HSPB1P04792 205 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 GPR89BP0CG08 455 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 ABOP16442 354 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 DESP17661 470 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 SDC1P18827 310 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PAICSP22234 425 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 MMP11P24347 488 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 DPP4P27487 766 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PBLDP30039 288 aaPredicted RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 PRDX3P30048 256 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 ADRA1AP35348 466 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 CYLC1P35663 651 aaPredicted RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 HSPA9P38646 679 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 PTGFRP43088 359 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 ALDH3B2P48448 385 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 SPINT3P49223 89 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 AIF1P55008 147 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PDZK1IP1Q13113 114 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 CAMK4Q16566 473 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 EXOC3L4Q17RC7 722 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 NKAIN1Q4KMZ8 207 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 CYBRD1Q53TN4 286 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PAGE2BQ5JRK9 111 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 HENMT1Q5T8I9 393 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 LGSNQ5TDP6 509 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 SLX4IPQ5VYV7 408 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 ATL3Q6DD88 541 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 ARSKQ6UWY0 536 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 WASH2PQ6VEQ5 465 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 LHFPL4Q7Z7J7 247 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 TRAPPC5Q8IUR0 188 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 ZNF547Q8IVP9 402 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 FAM71AQ8IYT1 594 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 TRAM1L1Q8N609 369 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 NPWQ8N729 165 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 WFDC11Q8NEX6 87 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 OR4E2Q8NGC2 313 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 CCDC110Q8TBZ0 833 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 NELFBQ8WX92 580 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PINX1Q96BK5 328 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 RMND5BQ96G75 393 aaPredicted RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 C16orf74Q96GX8 76 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 DHTKD1Q96HY7 919 aaPredicted RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 IMMP1LQ96LU5 166 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 GSDMAQ96QA5 445 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 C11orf70Q9BRQ4 267 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 TIMM29Q9BSF4 260 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 FICDQ9BVA6 458 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 C19orf24Q9BVV8 132 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 UCK2Q9BZX2 261 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 SRMSQ9H3Y6 488 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 CLSTN2Q9H4D0 955 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 DHX35Q9H5Z1 703 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 ZNF702PQ9H963 129 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 LPAR2Q9HBW0 351 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 ZNF160Q9HCG1 818 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 NT5MQ9NPB1 228 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 KCNJ16Q9NPI9 418 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 STMN3Q9NZ72 180 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 SLC2A6Q9UGQ3 507 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 PPIL1Q9Y3C6 166 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 AP1M2Q9Y6Q5 423 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 EML6Q6ZMW3 1958 aa2.23□□□□□ -2.05
XRN1-206ENST00000467077 ANKHD1Q8IWZ3 2542 aaKnown RBP2.23□□□□□ -2.05
XRN1-206ENST00000467077 NAV3Q8IVL0 2385 aa2.22□□□□□ -2.05
XRN1-206ENST00000467077 NSG1A0A0A6YYJ2 146 aa2.22□□□□□ -2.05
XRN1-206ENST00000467077 OR2AG2A6NM03 316 aa2.22□□□□□ -2.05
XRN1-206ENST00000467077 LRRC30A6NM36 301 aa2.22□□□□□ -2.05
XRN1-206ENST00000467077 SIGLEC16A6NMB1 481 aa2.22□□□□□ -2.05
XRN1-206ENST00000467077 C2orf74A8MZ97 194 aa2.22□□□□□ -2.05
XRN1-206ENST00000467077 PES1O00541 588 aaKnown RBP2.22□□□□□ -2.05
XRN1-206ENST00000467077 SDHDO14521 159 aa2.22□□□□□ -2.05
XRN1-206ENST00000467077 MAGEB4O15481 346 aaPredicted RBP2.22□□□□□ -2.05
XRN1-206ENST00000467077 RAMP1O60894 148 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms