RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 OTPQ5XKR4 325 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 TMPRSS11FQ6ZWK6 438 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 LRRC75A-AS1Q8N1F1 130 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 OR9Q2Q8NGE9 314 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 NMD3Q96D46 503 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 TRMT61AQ96FX7 289 aaKnown RBP8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 APOL4Q9BPW4 351 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 GSX2Q9BZM3 304 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 NDEL1Q9GZM8 345 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 GABARAPL1Q9H0R8 117 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 PALMDQ9NP74 551 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 IL1RAPQ9NPH3 570 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 CBLN4Q9NTU7 201 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 ZNF224Q9NZL3 707 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 CRNNQ9UBG3 495 aaPredicted RBP8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 GRHPRQ9UBQ7 328 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 SIGLEC7Q9Y286 467 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 CEPT1Q9Y6K0 416 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 U3KQV3 271 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 ARFGEF3Q5TH69 2177 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 PLCE1Q9P212 2302 aa8.45□□□□□ -1.06
RTFDC1-205ENST00000466260 IGHV2OR16-5A0A0B4J2B6 119 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 TNFRSF11BO00300 401 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 XKRYO14609 159 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 IMPA2O14732 288 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 SSX4O60224 188 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 NDUFB2O95178 105 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 IGLV1-44P01699 117 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 CD14P08571 375 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 CCL2P13500 99 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 CCNOP22674 350 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 DCKP27707 260 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 APOBEC3AP31941 199 aaPredicted RBP8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 MAGEA2P43356 314 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 SMIM11AP58511 58 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 CXCR4P61073 352 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 MVKQ03426 396 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 KRR1Q13601 381 aaKnown RBP8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 C11orf91Q3C1V1 193 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 MESTQ5EB52 335 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 ZNF544Q6NX49 715 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 TMEM53Q6P2H8 277 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 SHQ1Q6PI26 577 aaKnown RBP8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 PIWIL3Q7Z3Z3 882 aaKnown RBP8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 SVOPQ8N4V2 548 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 ZNF519Q8TB69 540 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 RAB2BQ8WUD1 216 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 IGFBPL1Q8WX77 278 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 BOD1Q96IK1 185 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 DHRS1Q96LJ7 313 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 RBP7Q96R05 134 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 GPA33Q99795 319 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 SMR3AQ99954 134 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 MRPL13Q9BYD1 178 aaKnown RBP8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 KCNN2Q9H2S1 579 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 OR52D1Q9H346 318 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 CA10Q9NS85 328 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 SCN3BQ9NY72 215 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 B3GNT2Q9NY97 397 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 FZR1Q9UM11 496 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 TPRKBQ9Y3C4 175 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 IER3IP1Q9Y5U9 82 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 CR1P17927 2039 aa8.44□□□□□ -1.06
RTFDC1-205ENST00000466260 F8P00451 2351 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 OTOGQ6ZRI0 2925 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 HTR3EA5X5Y0 456 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 A6NIZ1 184 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 NPIPB13A6NJU9 1138 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 NPIPB4C9JG80 1138 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 H7C1Q1 480 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 SLC16A6O15403 523 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 GPRIN2O60269 458 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 AVPP01185 164 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 OR4A8P0C604 315 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 FAM157BP0CG42 384 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 NR2C1P13056 603 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 ZNF14P17017 642 aaPredicted RBP8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 ZNF32P17041 273 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 EEF1B2P24534 225 aaKnown RBP8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 THBS4P35443 961 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 CENPAP49450 140 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 NUDT6P53370 316 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 FXYD6P3P58550 94 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 RAP1BP61224 184 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 RAP1AP62834 184 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 RELBQ01201 579 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 GALK2Q01415 458 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 HSF2Q03933 536 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 HGFACQ04756 655 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 DBPQ10586 325 aaPredicted RBP8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 ETFDHQ16134 617 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 HIST3H3Q16695 136 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 CLEC12BQ2HXU8 276 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 ANKDD1AQ495B1 522 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 SLC36A2Q495M3 483 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 C10orf128Q5T292 105 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 C11orf71Q6IPW1 123 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 SLC25A47Q6Q0C1 308 aa8.43□□□□□ -1.06
RTFDC1-205ENST00000466260 SMARCD3Q6STE5 483 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms