RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 POU2AF1Q16633 256 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 RAET1LQ5VY80 246 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 ANKRD26P1Q6NSI1 321 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 TEX43Q6ZNM6 134 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 TMEM179Q6ZVK1 233 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 MREGQ8N565 214 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 EID2Q8N6I1 236 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 CCDC54Q8NEL0 328 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 OR10G4Q8NGN3 311 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 OR4S2Q8NH73 311 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 PKNOX2Q96KN3 472 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 TGS1Q96RS0 853 aaKnown RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 PLIN2Q99541 437 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 SLC29A1Q99808 456 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 SPNS1Q9H2V7 528 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 RPP21Q9H633 154 aaKnown RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 CD84Q9UIB8 345 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 GGA2Q9UJY4 613 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 KIAA1257Q9ULG3 409 aa2.16□□□□□ -2.06
SMC4-205ENST00000465563 MRPS18BQ9Y676 258 aaKnown RBP2.16□□□□□ -2.06
SMC4-205ENST00000465563 BRWD3Q6RI45 1802 aa2.15□□□□□ -2.06
SMC4-205ENST00000465563 IGHV3-66A0A0C4DH42 116 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 GLYATL1P3A0A0U1RQE8 302 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 A0A1B0GVX0 72 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 CDC7O00311 574 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 DYNC1I1O14576 645 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 CLOCKO15516 846 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 SRP72O76094 671 aaKnown RBP2.15□□□□□ -2.07
SMC4-205ENST00000465563 OR2F2O95006 317 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 KRT14P02533 472 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 TROVE2P10155 538 aaKnown RBP eCLIP2.15□□□□□ -2.07
SMC4-205ENST00000465563 CD34P28906 385 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 FOXN2P32314 431 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 GPX4P36969 197 aaPredicted RBP2.15□□□□□ -2.07
SMC4-205ENST00000465563 ZNF138P52744 262 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 CACNG7P62955 275 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 ACTG2P63267 376 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 CCNA1P78396 465 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 TGM3Q08188 693 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 ALKBH6Q3KRA9 238 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 HSP90AB3PQ58FF7 597 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 ANKRD22Q5VYY1 191 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 ZNF880Q6PDB4 577 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 CCDC73Q6ZRK6 1079 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 SCD5Q86SK9 330 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 IQCKQ8N0W5 287 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 LIX1Q8N485 282 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 OR4C5Q8NGB2 326 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 OR10J6PQ8NGY7 276 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 CXorf40AQ8TE69 158 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 SLC38A4Q969I6 547 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 EXOSC8Q96B26 276 aaKnown RBP2.15□□□□□ -2.07
SMC4-205ENST00000465563 CCDC126Q96EE4 140 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 CENPKQ9BS16 269 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 NDFIP1Q9BT67 221 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 NOX3Q9HBY0 568 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 GPATCH2LQ9NWQ4 482 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 TSPOAP1O95153 1857 aa2.15□□□□□ -2.07
SMC4-205ENST00000465563 ITGB4P16144 1822 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 COL22A1Q8NFW1 1626 aaPredicted RBP2.14□□□□□ -2.07
SMC4-205ENST00000465563 TRBV9A0A0B4J1U6 114 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 ZNF816-ZNF321PA0A0X1KG74 233 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 CTAGE15A4D2H0 777 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 C9JVG2 144 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 PPP1R2P9O14990 202 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 KMOO15229 486 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 DPM1O60762 260 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 OR2J3O76001 311 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 CLIC3O95833 236 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 FTH1P02794 183 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 ANXA5P08758 320 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 CUL2Q13617 745 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 CLINT1Q14677 625 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 ZNF726P1Q15940 193 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 CARD17Q5XLA6 110 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 TMEM220Q6QAJ8 160 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 FAM92BQ6ZTR7 304 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 HDDC2Q7Z4H3 204 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 CTAGE6Q86UF2 777 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 FAM86B1Q8N7N1 296 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 NOXO1Q8NFA2 376 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 SEH1LQ96EE3 360 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 NEK6Q9HC98 313 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 ZNF629Q9UEG4 869 aaPredicted RBP2.14□□□□□ -2.07
SMC4-205ENST00000465563 VANGL2Q9ULK5 521 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 ST3GAL6Q9Y274 331 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 MAPK8IP3Q9UPT6 1336 aa2.14□□□□□ -2.07
SMC4-205ENST00000465563 IGLV1-36A0A0B4J1U3 117 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 IGHV3-74A0A0B4J1X5 117 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 IGHV5-51A0A0C4DH38 117 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 INS-IGF2F8WCM5 200 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 RP2O75695 350 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 CBR3O75828 277 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 AGTP01019 485 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 SERPINA5P05154 406 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 ZNF250P15622 560 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 UBE2AP49459 152 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 RAB10P61026 200 aa2.13□□□□□ -2.07
SMC4-205ENST00000465563 ADARB1P78563 741 aaKnown RBP2.13□□□□□ -2.07
SMC4-205ENST00000465563 SELENBP1Q13228 472 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms