RNA–Protein interactions for RNA: ENST00000465560.5

PTCD3-206, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 747 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-206ENST00000465560 PLEKHA6Q9Y2H5 1048 aa17.6■□□□□ 0.41
PTCD3-206ENST00000465560 TIMM10BQ9Y5J6 103 aa17.6■□□□□ 0.41
PTCD3-206ENST00000465560 ATP23Q9Y6H3 246 aa17.6■□□□□ 0.41
PTCD3-206ENST00000465560 IQCMA0A1B0GVH7 501 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 FAM171A2A8MVW0 826 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 E7EQL1 145 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 ATE1O95260 518 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 PTHP01270 115 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 ZNF35P13682 527 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 PSG4Q00888 419 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 AQP6Q13520 282 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 KEAP1Q14145 624 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 PTGES3Q15185 160 aaKnown RBP17.59■□□□□ 0.41
PTCD3-206ENST00000465560 TMEM236Q5W0B7 351 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 PROKR2Q8NFJ6 384 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 OR4F15Q8NGB8 312 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 OR9Q1Q8NGQ5 310 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 OR2H1Q9GZK4 316 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 TEX15Q9BXT5 2789 aa17.59■□□□□ 0.41
PTCD3-206ENST00000465560 EI24O14681 340 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 ALPLP05186 524 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 SPI1P17947 270 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 CD53P19397 219 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 DNASE1P24855 282 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 PYCR1P32322 319 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 SCRN3Q0VDG4 424 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 DAG1Q14118 895 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 MEP1BQ16820 701 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 OTPQ5XKR4 325 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 SLC30A7Q8NEW0 376 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 NUP37Q8NFH4 326 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 AKR7LQ8NHP1 331 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 DHRS9Q9BPW9 319 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 GABARAPL3Q9BY60 117 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 WNT5BQ9H1J7 359 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 USE1Q9NZ43 259 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 ASH2LQ9UBL3 628 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 MAST4O15021 2626 aa17.58■□□□□ 0.4
PTCD3-206ENST00000465560 FAM183AA6NL82 134 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 ZAR1LA6NP61 321 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 BAG2O95816 211 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 HLA-DQA2P01906 255 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 TFP02787 698 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 GYPBP06028 91 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 DANCRP0C864 163 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 CLUP10909 449 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 PAICSP22234 425 aaKnown RBP17.57■□□□□ 0.4
PTCD3-206ENST00000465560 APEX1P27695 318 aaKnown RBP17.57■□□□□ 0.4
PTCD3-206ENST00000465560 EPHA2P29317 976 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 TEKQ02763 1124 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 HGFACQ04756 655 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 TBC1D28Q2M2D7 210 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 ZNF544Q6NX49 715 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 ALDH16A1Q8IZ83 802 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 CPEB3Q8NE35 698 aaKnown RBP17.57■□□□□ 0.4
PTCD3-206ENST00000465560 OR10H5Q8NGA6 315 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 OR51L1Q8NGJ5 315 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 SMAP2Q8WU79 429 aaPredicted RBP17.57■□□□□ 0.4
PTCD3-206ENST00000465560 ZNRF4Q8WWF5 429 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 IGFBPL1Q8WX77 278 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 PLEKHA8Q96JA3 519 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 CCL19Q99731 98 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 C9orf16Q9BUW7 83 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 HCAR1Q9BXC0 346 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 PRRG3Q9BZD7 231 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 FAIMQ9NVQ4 179 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 POLR1DQ9Y2S0 133 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 CCDC168Q8NDH2 2452 aa17.57■□□□□ 0.4
PTCD3-206ENST00000465560 PRR23D1E9PI22 279 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-206ENST00000465560 SNAP29O95721 258 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 PRR23D2P0DMB1 279 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-206ENST00000465560 STOMP27105 288 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 APLNRP35414 380 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 ALDH3A2P51648 485 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 SLX4IPQ5VYV7 408 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 ZNF774Q6NX45 483 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.56■□□□□ 0.4
PTCD3-206ENST00000465560 CBR4Q8N4T8 237 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 OR1J2Q8NGS2 313 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 PTP4A1Q93096 173 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 PIGTQ969N2 578 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 MED20Q9H944 212 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 CA10Q9NS85 328 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 MRPL22Q9NWU5 206 aaKnown RBP17.56■□□□□ 0.4
PTCD3-206ENST00000465560 TVP23BQ9NYZ1 205 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 KCNG2Q9UJ96 466 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 LHFPL6Q9Y693 200 aa17.56■□□□□ 0.4
PTCD3-206ENST00000465560 AKAP9Q99996 3911 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 SGCEO43556 437 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 DOK2O60496 412 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 SOD3P08294 240 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 CCL2P13500 99 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 NR4A1P22736 598 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 TTKP33981 857 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 FABP6P51161 128 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 BLVRAP53004 296 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 NKX6-1P78426 367 aaPredicted RBP17.55■□□□□ 0.4
PTCD3-206ENST00000465560 GALK2Q01415 458 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 RCN1Q15293 331 aa17.55■□□□□ 0.4
PTCD3-206ENST00000465560 SNAPC1Q16533 368 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms