RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 H3F3CQ6NXT2 135 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 SVBPQ8N300 66 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 ADAD2Q8NCV1 583 aaKnown RBP11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 UPB1Q9UBR1 384 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 CTSFQ9UBX1 484 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 YBX2Q9Y2T7 364 aaKnown RBP11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 KCNK7Q9Y2U2 307 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 WIPF3A6NGB9 483 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 CRYBA1P05813 215 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 CBR1P16152 277 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 ZNF10P21506 573 aaPredicted RBP11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 VAMP1P23763 118 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 GJA4P35212 333 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC25A1P53007 311 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 GPR85P60893 370 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 RPS21P63220 83 aaKnown RBP11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 CDNFQ49AH0 187 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC43A2Q8N370 569 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 CSNK1A1LQ8N752 337 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 BCORP1Q8N888 145 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 BHLHE23Q8NDY6 225 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 TMED6Q8WW62 240 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 RBM18Q96H35 190 aaKnown RBP11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC41A2Q96JW4 573 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 INTS14Q96SY0 518 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 PRR13Q9NZ81 148 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 EPHA6Q9UF33 1036 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 HIF3AQ9Y2N7 669 aa11.35□□□□□ -0.59
CLCNKA-204ENST00000464764 A0A0B4J2A0 478 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC35E2P0CK97 266 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 AKR1C4P17516 323 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 PRKXP51817 358 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 PNLIPRP2P54317 469 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ACTBP60709 375 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ACTG1P63261 375 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 EIF2B1Q14232 305 aaKnown RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ZNF141Q15928 474 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TMEM225Q6GV28 225 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 RAB11FIP2Q7L804 512 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 MARCH3Q86UD3 253 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 GTPBP8Q8N3Z3 284 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 JAGN1Q8N5M9 183 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 OR5AP2Q8NGF4 316 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 OR4A4PQ8NGN8 299 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SPPL3Q8TCT6 385 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 FAM60AQ9NP50 221 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TREM1Q9NP99 234 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 MMP25Q9NPA2 562 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 POLE3Q9NRF9 147 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC22A11Q9NSA0 550 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 GDE1Q9NZC3 331 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SHPKQ9UHJ6 478 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 A0A0A6YYC8 382 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 I3L1I5 382 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ST6GAL1P15907 406 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 HTR2CP28335 458 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 PMPCAQ10713 525 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TANGO2Q6ICL3 276 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 FAM166AQ6J272 317 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TMEM200AQ86VY9 491 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 METTL27Q8N6F8 245 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TMEM229BQ8NBD8 167 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 C16orf52Q8NHV5 167 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 PHOSPHO1Q8TCT1 267 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 FAM46BQ96A09 425 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TRIM43Q96BQ3 446 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ASB16Q96NS5 453 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 GPX7Q96SL4 187 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC25A21Q9BQT8 299 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ZNF629Q9UEG4 869 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 HEBP2Q9Y5Z4 205 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TRANK1O15050 2925 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 OR5K4A6NMS3 321 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC25A4P12235 298 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ZBTB25P24278 435 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 IL13RA1P78552 427 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 OR10R2Q8NGX6 335 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 ELP5Q8TE02 316 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 TAAR8Q969N4 342 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SLC22A18Q96BI1 424 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 LMF2Q9BU23 707 aaKnown RBP11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 FANCFQ9NPI8 374 aa11.34□□□□□ -0.59
CLCNKA-204ENST00000464764 SEC16AO15027 2179 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 EFCAB7A8K855 629 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF705EA8MWA4 302 aaPredicted RBP11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 TNFSF14O43557 240 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 TMEM127O75204 238 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 MPZL1O95297 269 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 SPARCP09486 303 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 MAOAP21397 527 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ZNF345Q14585 488 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 KIR2DS3Q14952 304 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 IGSF11Q5DX21 431 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ETV3LQ6ZN32 361 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 PARGQ86W56 976 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 INO80EQ8NBZ0 244 aaPredicted RBP11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 RXFP4Q8TDU9 374 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 ASB5Q8WWX0 329 aa11.33□□□□□ -0.6
CLCNKA-204ENST00000464764 RRNAD1Q96FB5 475 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms