RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 CA10Q9NS85 328 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 CBLN4Q9NTU7 201 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 NKX1-2Q9UD57 310 aaPredicted RBP14.76□□□□□ -0.05
VPS52-215ENST00000464425 ORC6Q9Y5N6 252 aa14.76□□□□□ -0.05
VPS52-215ENST00000464425 A0A1W2PPL8 197 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 TMCC2O75069 709 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 HMGN1P05114 100 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 PAX1P15863 534 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 NPR2P20594 1047 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 MRPS34P82930 218 aaKnown RBP14.75□□□□□ -0.05
VPS52-215ENST00000464425 ETFDHQ16134 617 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 NRN1LQ496H8 165 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 SLC35F1Q5T1Q4 408 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 OGFRL1Q5TC84 451 aaPredicted RBP14.75□□□□□ -0.05
VPS52-215ENST00000464425 SHEQ5VZ18 495 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 TMEM53Q6P2H8 277 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 PTCHD4Q6ZW05 846 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 JAZF1Q86VZ6 243 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 ZNF584Q8IVC4 421 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 PACRGLQ8N7B6 248 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 IL17RDQ8NFM7 739 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 OR4F15Q8NGB8 312 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 NABP1Q96AH0 204 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 FBXO17Q96EF6 278 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 FOXN4Q96NZ1 517 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 DDOQ99489 341 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 KCNN2Q9H2S1 579 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 RERGLQ9H628 205 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 CMC2Q9NRP2 79 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 KLHL21Q9UJP4 597 aa14.75□□□□□ -0.05
VPS52-215ENST00000464425 ZAR1LA6NP61 321 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 RENP00797 406 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 SERPINA5P05154 406 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 LAP3P28838 519 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 THBS4P35443 961 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 GUCA1AP43080 201 aaPredicted RBP14.74□□□□□ -0.05
VPS52-215ENST00000464425 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.74□□□□□ -0.05
VPS52-215ENST00000464425 LPCAT4Q643R3 524 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 KRT80Q6KB66 452 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 ACSM5Q6NUN0 579 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 DPPA2Q7Z7J5 298 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 NPEPL1Q8NDH3 523 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 OR52E2Q8NGJ4 325 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 OR4K13Q8NH42 304 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 TRMT61AQ96FX7 289 aaKnown RBP14.74□□□□□ -0.05
VPS52-215ENST00000464425 RDH12Q96NR8 316 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 NMNAT3Q96T66 252 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 CACNG6Q9BXT2 260 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 SYT4Q9H2B2 425 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 CCNB1IP1Q9NPC3 277 aa14.74□□□□□ -0.05
VPS52-215ENST00000464425 TEP1Q99973 2627 aaKnown RBP14.73□□□□□ -0.05
VPS52-215ENST00000464425 SLC16A7O60669 478 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 NDUFS7O75251 213 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 IFNGP01579 166 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 SCG5P05408 212 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 OR4A8P0C604 315 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 CCL2P13500 99 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 ZNF35P13682 527 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 CTLA4P16410 223 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 CRABP1P29762 137 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 SERPINF1P36955 418 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 SNTB2Q13425 540 aaKnown RBP14.73□□□□□ -0.05
VPS52-215ENST00000464425 FAM27BQ5VT28 67 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 SLX4IPQ5VYV7 408 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 C11orf71Q6IPW1 123 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 LEG1Q6P5S2 330 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 IQCF1Q8N6M8 205 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 NUP37Q8NFH4 326 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 GRIP2Q9C0E4 1043 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 GDF2Q9UK05 429 aaPredicted RBP14.73□□□□□ -0.05
VPS52-215ENST00000464425 FBXL3Q9UKT7 428 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 VPS13CQ709C8 3753 aa14.73□□□□□ -0.05
VPS52-215ENST00000464425 MED13LQ71F56 2210 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 OR6C68A6NDL8 312 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 RIIAD1A6NNX1 92 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 E9PQ18 207 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 SURF4O15260 269 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 ATP6V1G2O95670 118 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 MMP7P09237 267 aaPredicted RBP14.72□□□□□ -0.05
VPS52-215ENST00000464425 CD99P14209 185 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 ZNF32P17041 273 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 NR4A1P22736 598 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 PEX2P28328 305 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 EPHA2P29317 976 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 POLR2IP36954 125 aaKnown RBP14.72□□□□□ -0.05
VPS52-215ENST00000464425 GALK2Q01415 458 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 HSF2Q03933 536 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 PLP2Q04941 152 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 DBPQ10586 325 aaPredicted RBP14.72□□□□□ -0.05
VPS52-215ENST00000464425 ADIPOQQ15848 244 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 LRRC36Q1X8D7 754 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 MST1LQ2TV78 715 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 PABPC1L2AQ5JQF8 200 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 TMEM236Q5W0B7 351 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 OTPQ5XKR4 325 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 DNM1P34Q6PK57 102 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 UGT2A3Q6UWM9 527 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 ZBTB46Q86UZ6 589 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 SLC37A3Q8NCC5 494 aa14.72□□□□□ -0.05
VPS52-215ENST00000464425 SLC30A7Q8NEW0 376 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms