RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 SLC25A25Q6KCM7 469 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 LRRC69Q6ZNQ3 347 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 SULF2Q8IWU5 870 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 OR2M7Q8NG81 312 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 OR5AK2Q8NH90 309 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 HAVCR2Q8TDQ0 301 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 THEM6Q8WUY1 208 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 MRPL39Q9NYK5 338 aaKnown RBP12.96□□□□□ -0.33
COL5A1-205ENST00000464187 BOKQ9UMX3 212 aaPredicted RBP12.96□□□□□ -0.33
COL5A1-205ENST00000464187 PCDHGA9Q9Y5G4 932 aaKnown RBP12.96□□□□□ -0.33
COL5A1-205ENST00000464187 CACNA1CQ13936 2221 aa12.96□□□□□ -0.33
COL5A1-205ENST00000464187 IGLV1-36A0A0B4J1U3 117 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 TRBV5-5A0A0J9YX44 114 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OR2M5A3KFT3 312 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 PDCD5O14737 125 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 SLC43A1O75387 559 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OPN1LWP04000 364 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 SP1P08047 785 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 AGFG1P52594 562 aaKnown RBP12.95□□□□□ -0.34
COL5A1-205ENST00000464187 MELKQ14680 651 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 ESPNLQ6ZVH7 1005 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 ASB18Q6ZVZ8 466 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 GALNTL5Q7Z4T8 443 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OR2G2Q8NGZ5 317 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OR6S1Q8NH40 331 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OTOSQ8NHW6 89 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 SLC25A43Q8WUT9 341 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-205ENST00000464187 FOXN4Q96NZ1 517 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 POTEKPQ9BYX7 375 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 NEK6Q9HC98 313 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 SLCO1C1Q9NYB5 712 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 NUFIP1Q9UHK0 495 aaKnown RBP12.95□□□□□ -0.34
COL5A1-205ENST00000464187 TMEM14AQ9Y6G1 99 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 DMXL2Q8TDJ6 3036 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 SLC22A23A1A5C7 686 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OR4C45A6NMZ5 311 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 PHYHO14832 338 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 NME2P1O60361 137 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 UBL3O95164 117 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OR6A2O95222 327 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 CD46P15529 392 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 CTLA4P16410 223 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF17P17021 662 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 NME2P22392 152 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 FKBP2P26885 142 aaKnown RBP12.95□□□□□ -0.34
COL5A1-205ENST00000464187 GDF1P27539 372 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 C19orf57Q0VDD7 668 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 MYBPHQ13203 477 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 OR7A5Q15622 319 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 TATDN3Q17R31 274 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 Q499Y3 187 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 UBE2NLQ5JXB2 153 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 HES5Q5TA89 166 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 YRDCQ86U90 279 aaKnown RBP12.95□□□□□ -0.34
COL5A1-205ENST00000464187 PRSS35Q8N3Z0 413 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 MFSD8Q8NHS3 518 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF671Q8TAW3 534 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 UBASH3BQ8TF42 649 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 PIGQQ9BRB3 760 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 MARVELD1Q9BSK0 173 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
COL5A1-205ENST00000464187 KLF13Q9Y2Y9 288 aaPredicted RBP12.95□□□□□ -0.34
COL5A1-205ENST00000464187 ALG5Q9Y673 324 aa12.95□□□□□ -0.34
COL5A1-205ENST00000464187 SPTBN4Q9H254 2564 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 IFITM5A6NNB3 132 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 HSPB2A8KAH6 182 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 AIPO00170 330 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 SLC16A7O60669 478 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 TRAPPC6AO75865 159 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 HLA-DQA2P01906 255 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 HLA-DOBP13765 273 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 HLA-DMAP28067 261 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 SFTPDP35247 375 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 RFC3P40938 356 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 MFSD13AQ14CX5 517 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 HSPB2Q16082 182 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 TMEM176BQ3YBM2 270 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-205ENST00000464187 OR14L1PQ8NHC6 308 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 NSMAFQ92636 917 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 YIPF5Q969M3 257 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF486Q96H40 463 aaPredicted RBP12.94□□□□□ -0.34
COL5A1-205ENST00000464187 C5orf34Q96MH7 638 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 MOV10Q9HCE1 1003 aaKnown RBP12.94□□□□□ -0.34
COL5A1-205ENST00000464187 SSUH2Q9Y2M2 353 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 N6AMT1Q9Y5N5 214 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 CSAG2Q9Y5P2 127 aa12.94□□□□□ -0.34
COL5A1-205ENST00000464187 APC2O95996 2303 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 A0A1W2PNR3 127 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 LIPT2A6NK58 231 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 KLRC4-KLRK1H3BQV0 150 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF593O00488 134 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-205ENST00000464187 ZNF254O75437 659 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 CEACAM4O75871 244 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 ADRB1P08588 477 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 MAPK3P27361 379 aaPredicted RBP12.93□□□□□ -0.34
COL5A1-205ENST00000464187 SLC6A1P30531 599 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 BTCP35070 178 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 KIR3DL2P43630 455 aa12.93□□□□□ -0.34
COL5A1-205ENST00000464187 SOX2P48431 317 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms