RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 KIAA1328Q86T90 577 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 PSTKQ8IV42 348 aaKnown RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 LRRC17Q8N6Y2 441 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ZNRF2Q8NHG8 242 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ZNF563Q8TA94 476 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 CNIH3Q8TBE1 160 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FAM213BQ8TBF2 198 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SLC7A6Q92536 515 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ECHDC3Q96DC8 303 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ZNF625Q96I27 306 aaPredicted RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 IGF2BP2-AS1Q96M15 143 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ZFP3Q96NJ6 502 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ZNF251Q9BRH9 671 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FAM213AQ9BRX8 229 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 UTP14AQ9BVJ6 771 aaKnown RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 POLR1EQ9GZS1 481 aaKnown RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 AGPAT4-IT1Q9H0P7 198 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SAV1Q9H4B6 383 aaPredicted RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 UBQLN4Q9NRR5 601 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 BCAP29Q9UHQ4 241 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ANAPC7Q9UJX3 599 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FOXJ3Q9UPW0 622 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 CDK13Q14004 1512 aaKnown RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 DNAJC13O75165 2243 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 UBR2Q8IWV8 1755 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 KIAA2026Q5HYC2 2103 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 CLSPNQ9HAW4 1339 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 CCDC7Q96M83 1385 aa-0.66□□□□□ -2.51
TMEM56-204ENST00000463375 JCADQ9P266 1359 aa-0.66□□□□□ -2.51
TMEM56-204ENST00000463375 CCDC88AQ3V6T2 1871 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 IGHV1OR15-9A0A0B4J2B8 117 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 A0A0G2JMM0 328 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 LOC107986453A0A1B0GWG9 222 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 A0A1W2PPB8 328 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 A0A1W2PRS3 328 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 LRRC30A6NM36 301 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 KIR3DP1A8MWS1 328 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 MFNGO00587 321 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 UGT1A9O60656 530 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 LGALS2P05162 132 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 TBXA2RP21731 343 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ME2P23368 584 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 MPV17P39210 176 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 CRYBB1P53674 252 aaPredicted RBP-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 SNU13P55769 128 aaKnown RBP-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 PPP1CBP62140 327 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 C2orf54Q08AI8 447 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 IFFO1Q0D2I5 559 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 BIKQ13323 160 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 VGLL4Q14135 290 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 DEFB115Q30KQ5 88 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 PRAMEF7Q5VXH5 474 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ACSM5Q6NUN0 579 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 RABEPKQ7Z6M1 372 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 HOOK3Q86VS8 718 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 IQCA1Q86XH1 822 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF619Q8N2I2 560 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ZADH2Q8N4Q0 377 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 MREGQ8N565 214 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ANKRD20A12PQ8NF67 263 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 TNFRSF14Q92956 283 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 EMG1Q92979 244 aaKnown RBP-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 NAT6Q93015 286 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ZC2HC1AQ96GY0 325 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 C12orf42Q96LP6 360 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 PITX2Q99697 317 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 GABRG3Q99928 467 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 GABARAPL3Q9BY60 117 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ALX4Q9H161 411 aaPredicted RBP-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ABCG4Q9H172 646 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 UGT1A7Q9HAW7 530 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 UGT1A10Q9HAW8 530 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 UGT1A8Q9HAW9 530 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 SPATA7Q9P0W8 599 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 STAP1Q9ULZ2 295 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF443Q9Y2A4 671 aaPredicted RBP-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 IKBKGQ9Y6K9 419 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ASPMQ8IZT6 3477 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 MYO9BQ13459 2157 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 PLCE1Q9P212 2302 aa-0.66□□□□□ -2.52
TMEM56-204ENST00000463375 ALKQ9UM73 1620 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 CEMIPQ8WUJ3 1361 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 ARHGAP32A7KAX9 2087 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 MDC1Q14676 2089 aaKnown RBP-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 NSG1A0A0A6YYJ2 146 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 A0A0D9SG42 100 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 CIB4A0PJX0 185 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF879B4DU55 563 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 LOC730098B7Z3J9 87 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 DEFB4AO15263 64 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 TRIM16O95361 564 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 FSTL3O95633 263 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 NDUFB10O96000 172 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 F10P00742 488 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 IGLV7-43P04211 117 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 CD3DP04234 171 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 CTSGP08311 255 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 GSTT2P0CG29 244 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 GSTT2BP0CG30 244 aa-0.67□□□□□ -2.52
TMEM56-204ENST00000463375 ZNF18P17022 549 aa-0.67□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms