RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 SLC36A2Q495M3 483 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 KCTD18Q6PI47 426 aaPredicted RBP9.38□□□□□ -0.91
RTF1-202ENST00000462276 XKRXQ6PP77 449 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 TMPRSS11AQ6ZMR5 421 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 ZNF813Q6ZN06 617 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 LINGO2Q7L985 606 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 SLC35F2Q8IXU6 374 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 GJC3Q8NFK1 279 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 STEAP2Q8NFT2 490 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 TSPAN14Q8NG11 270 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 OR10H4Q8NGA5 316 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 OR6N2Q8NGY6 317 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 LILRB4Q8NHJ6 448 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 PRR7Q8TB68 274 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 ZNRF4Q8WWF5 429 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 NANOS1Q8WY41 292 aaKnown RBP9.38□□□□□ -0.91
RTF1-202ENST00000462276 FCGR1BQ92637 280 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 BCL2L2Q92843 193 aaPredicted RBP9.38□□□□□ -0.91
RTF1-202ENST00000462276 NABP1Q96AH0 204 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 SIGLEC11Q96RL6 698 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 C1orf198Q9H425 327 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 MRPL22Q9NWU5 206 aaKnown RBP9.38□□□□□ -0.91
RTF1-202ENST00000462276 SH3BGRL2Q9UJC5 107 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 LAMP5Q9UJQ1 280 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 FBXL3Q9UKT7 428 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 POLR1DQ9Y2S0 133 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 CAB39Q9Y376 341 aaPredicted RBP9.38□□□□□ -0.91
RTF1-202ENST00000462276 TIMM10BQ9Y5J6 103 aa9.38□□□□□ -0.91
RTF1-202ENST00000462276 ZGRF1Q86YA3 2104 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 TMEM129A0AVI4 362 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 TVP23AA6NH52 213 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 LRRTM2O43300 516 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 SELENOFO60613 162 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ITGA5P08648 1049 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 TACSTD2P09758 323 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 PPP3CBP16298 524 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 IGHV1-2P23083 117 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 EDNRAP25101 427 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 CDAP32320 146 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 DCTDP32321 178 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ROM1Q03395 351 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 SFRP5Q5T4F7 317 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ZNF474Q6S9Z5 364 aaPredicted RBP9.37□□□□□ -0.91
RTF1-202ENST00000462276 B3GLCTQ6Y288 498 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 PLEKHG7Q6ZR37 379 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 SLC16A14Q7RTX9 510 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 DPY19L4Q7Z388 723 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 CDC20BQ86Y33 519 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ALDH16A1Q8IZ83 802 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 SYS1Q8N2H4 156 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ZNF433Q8N7K0 673 aaPredicted RBP9.37□□□□□ -0.91
RTF1-202ENST00000462276 FAM169BQ8N8A8 192 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 OR4F15Q8NGB8 312 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 OR1K1Q8NGR3 316 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 OR52N1Q8NH53 320 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ZNF837Q96EG3 531 aaPredicted RBP9.37□□□□□ -0.91
RTF1-202ENST00000462276 ZNF416Q9BWM5 594 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 OPN3Q9H1Y3 402 aaPredicted RBP9.37□□□□□ -0.91
RTF1-202ENST00000462276 NIPAL2Q9H841 368 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ATPIF1Q9UII2 106 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 SLC5A6Q9Y289 635 aa9.37□□□□□ -0.91
RTF1-202ENST00000462276 ARPC4-TTLL3A0A0A6YYG9 625 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 A0A1W2PQL4 384 aaPredicted RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 TRIM64CA6NLI5 447 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 EEF1E1-BLOC1S5C9J1V9 151 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 C16orf97H3BN30 126 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 EEF1E1O43324 174 aaKnown RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 UBL3O95164 117 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 MPZL1O95297 269 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 PTHP01270 115 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 APOC1P02654 83 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 RPSAP08865 295 aaKnown RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 SPARCP09486 303 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 COX5BP10606 129 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 B4GALT1P15291 398 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 GNLYP22749 145 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 IL32P24001 234 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 C21orf33P30042 268 aaPredicted RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 HOXC12P31275 282 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 CD79BP40259 229 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 PEX19P40855 299 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 NAA10P41227 235 aaPredicted RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 ASCL1P50553 236 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 UBE2NP61088 152 aaKnown RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 HIST1H3AP68431 136 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 ENDOGQ14249 297 aaKnown RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 IRF3Q14653 427 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 TBCEQ15813 527 aaPredicted RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 IGFBP7Q16270 282 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 GABRA6Q16445 453 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 TIMM23BQ5SRD1 257 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 HIST2H3PS2Q5TEC6 136 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 TMEM53Q6P2H8 277 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 KLHL24Q6TFL4 600 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 ZNF322Q6U7Q0 402 aaPredicted RBP9.36□□□□□ -0.91
RTF1-202ENST00000462276 HIST2H3AQ71DI3 136 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 FJX1Q86VR8 437 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 SPARTQ8N0X7 666 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 KLHL36Q8N4N3 616 aa9.36□□□□□ -0.91
RTF1-202ENST00000462276 ZNF808Q8N4W9 903 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms