RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ZNF584Q8IVC4 421 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 KIR3DL3Q8N743 410 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 ICA1LQ8NDH6 482 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 ADPRHL1Q8NDY3 354 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 TPD52L3Q96J77 140 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 EGLN1Q9GZT9 426 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 C1orf198Q9H425 327 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 MMP26Q9NRE1 261 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 RPS6KB2Q9UBS0 482 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 BAG5Q9UL15 447 aa14.57□□□□□ -0.08
TOP3A-202ENST00000461127 ZNF443Q9Y2A4 671 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-202ENST00000461127 TCRBV5S2A0A599 114 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 TCRBV3S1A0A5B6 114 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 MFN2O95140 757 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 GPANK1O95872 356 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 UMPSP11172 480 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 MAKP20794 623 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 ZNF81P51508 661 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 FAM98BQ52LJ0 330 aaKnown RBP14.56□□□□□ -0.08
TOP3A-202ENST00000461127 FKBP9P1Q75LS8 142 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 SKA3Q8IX90 412 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 SMYD1Q8NB12 490 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 OR1J2Q8NGS2 313 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 TAAR8Q969N4 342 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 PYURFQ96I23 114 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 HSH2DQ96JZ2 352 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 CITED1Q99966 193 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 AURKCQ9UQB9 309 aa14.56□□□□□ -0.08
TOP3A-202ENST00000461127 POLR3KQ9Y2Y1 108 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-202ENST00000461127 PLSCR5A0PG75 271 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 PTHP01270 115 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 PATE4P0C8F1 98 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 ZNF12P17014 697 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 UCP2P55851 309 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 RAG2P55895 527 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 ERVS71-1P61550 626 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 SELENOWP63302 87 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 GLO1Q04760 184 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 PMS2P3Q13401 168 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 TBC1D28Q2M2D7 210 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 OLFML2AQ68BL7 652 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 TMEM53Q6P2H8 277 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 CLIP4Q8N3C7 705 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 KLHL36Q8N4N3 616 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 SPICQ8N5J4 248 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 OR52E2Q8NGJ4 325 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 SLC47A1Q96FL8 570 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 DIRC2Q96SL1 478 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 SEPHS2Q99611 448 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 INSIG2Q9Y5U4 225 aa14.55□□□□□ -0.08
TOP3A-202ENST00000461127 TRAV36DV7A0A075B6V5 113 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 MS4A18H0YCH9 400 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 FKBP6O75344 327 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 FARS2O95363 451 aaKnown RBP14.54□□□□□ -0.08
TOP3A-202ENST00000461127 SNAP29O95721 258 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 IGHV3-13P01766 116 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 CCL2P13500 99 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 HLA-DOBP13765 273 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 HOXB6P17509 224 aaKnown RBP14.54□□□□□ -0.08
TOP3A-202ENST00000461127 CD247P20963 164 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 CBLP22681 906 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 PRKAR1BP31321 381 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 CSNK1A1P48729 337 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 CRYBA2P53672 197 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 MS4A18Q3C1V0 323 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 IFI44LQ53G44 452 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 ZFP1Q6P2D0 407 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 DHRS4L2Q6PKH6 230 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 C9orf139Q6ZV77 190 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 C1QL4Q86Z23 238 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 ADGRG5Q8IZF4 528 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 PARP8Q8N3A8 854 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 PAQR4Q8N4S7 273 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-202ENST00000461127 FAM86B1Q8N7N1 296 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 CANT1Q8WVQ1 401 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 GTF3AQ92664 365 aaKnown RBP14.54□□□□□ -0.08
TOP3A-202ENST00000461127 RNF121Q9H920 327 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 C12orf10Q9HB07 376 aa14.54□□□□□ -0.08
TOP3A-202ENST00000461127 A0A087WUJ7 227 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 FAM181BA6NEQ2 426 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 TRAPPC2LH3BP13 241 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 SPRY3O43610 288 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 HPRP00739 348 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 IGHV1-46P01743 117 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 SBK2P0C263 348 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 VTCN1Q7Z7D3 282 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 DPPA2Q7Z7J5 298 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 SLC22A24Q8N4F4 322 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 FGFBP3Q8TAT2 258 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 PYDC1Q8WXC3 89 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 GEMIN6Q8WXD5 167 aaKnown RBP14.53□□□□□ -0.08
TOP3A-202ENST00000461127 TXNDC15Q96J42 360 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 RBM4BQ9BQ04 359 aaKnown RBP14.53□□□□□ -0.08
TOP3A-202ENST00000461127 ASPNQ9BXN1 380 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 MAGIXQ9H6Y5 334 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 YY1AP1Q9H869 796 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 AP4S1Q9Y587 144 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 NPTNQ9Y639 398 aa14.53□□□□□ -0.08
TOP3A-202ENST00000461127 IQCMA0A1B0GVH7 501 aa14.52□□□□□ -0.09
TOP3A-202ENST00000461127 HOXA3O43365 443 aaPredicted RBP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms