RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 NEFHP12036 1026 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CCL2P13500 99 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 NQO1P15559 274 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 VEGFCP49767 419 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CRISP1P54107 249 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 KRTAP10-5P60370 271 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 MAGOHP61326 146 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 NCALDP61601 193 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 LMO4P61968 165 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 SLC39A6Q13433 755 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 RUNX3Q13761 415 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 GPR107Q5VW38 600 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 STUMQ69YW2 141 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ZNF343Q6P1L6 599 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ASCL4Q6XD76 172 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CERS6Q6ZMG9 384 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ZNF600Q6ZNG1 722 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 GPRIN3Q6ZVF9 776 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 FAM122BQ7Z309 247 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 SLC25A42Q86VD7 318 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ZNF100Q8IYN0 542 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 JAGN1Q8N5M9 183 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 WDSUB1Q8N9V3 476 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TTC29Q8NA56 475 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 GATSQ8NAP1 163 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 FBXL13Q8NEE6 735 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 OR1S2Q8NGQ3 325 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CA5BP1Q8WTZ4 195 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CAPSLQ8WWF8 208 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.29□□□□□ -2.04
HPS3-203ENST00000460822 STMN2Q93045 179 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 MAGOHBQ96A72 148 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 LRRC45Q96CN5 670 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TLCD1Q96CP7 247 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CHMP6Q96FZ7 201 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 SEC22AQ96IW7 307 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 JSRP1Q96MG2 331 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 OPALINQ96PE5 141 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ZNF317Q96PQ6 595 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 KCNS3Q9BQ31 491 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 KLHDC3Q9BQ90 382 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 PRRG3Q9BZD7 231 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 UCK2Q9BZX2 261 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 ADAMTSL3P82987 1691 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 LRP5O75197 1615 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 MYH11P35749 1972 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 NUP98P52948 1817 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TMEM120BA0PK00 339 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 DHRS7CA6NNS2 312 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 LOC110117498-PIK3R3F6TDL0 507 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 F8VZ95 297 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ZBTB5O15062 677 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 GALR3O60755 368 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 E2F6O75461 281 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CCNB2O95067 398 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 FGFR1OPO95684 399 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 IFNW1P05000 195 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CCNOP22674 350 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CFHR2P36980 270 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ERVK-25P63136 954 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TNNC1P63316 161 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 LCN2P80188 198 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 MS4A2Q01362 244 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CHRNB3Q05901 458 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TGIF1Q15583 401 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ALX1Q15699 326 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 IL17AQ16552 155 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 KIF26BQ2KJY2 2108 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 NSUN5P1Q3KNT7 163 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 SAMD4BQ5PRF9 694 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 HDDC2Q7Z4H3 204 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 APOBEC3FQ8IUX4 373 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 NRMQ8IXM6 262 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 LRRC34Q8IZ02 419 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 ST13P4Q8IZP2 240 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 RNF10Q8N5U6 811 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 INO80EQ8NBZ0 244 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 FBXO36Q8NEA4 188 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 OR2A12Q8NGT7 310 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 PYROXD1Q8WU10 500 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CACNG8Q8WXS5 425 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 FGF11Q92914 225 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 MS4A4EQ96PG1 132 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 CSPG4P5Q96PW8 444 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TSC22D3Q99576 134 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 MRPL45Q9BRJ2 306 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 TMEM246Q9BRR3 403 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 FAIM2Q9BWQ8 316 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 TMEM59Q9BXS4 323 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 SRXN1Q9BYN0 137 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 MFFQ9GZY8 342 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 RANBP3Q9H6Z4 567 aaPredicted RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 NRBP2Q9NSY0 501 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 FLVCR2Q9UPI3 526 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 SLC17A4Q9Y2C5 497 aa2.29□□□□□ -2.04
HPS3-203ENST00000460822 RBMX2Q9Y388 322 aaKnown RBP2.29□□□□□ -2.04
HPS3-203ENST00000460822 ZNFX1Q9P2E3 1918 aaKnown RBP2.28□□□□□ -2.04
HPS3-203ENST00000460822 CACNA1SQ13698 1873 aa2.28□□□□□ -2.04
HPS3-203ENST00000460822 C1orf167Q5SNV9 1468 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms