RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 SH3GL1Q99961 368 aa2.15□□□□□ -2.07
RFC4-211ENST00000460408 KCTD14Q9BQ13 255 aaPredicted RBP2.15□□□□□ -2.07
RFC4-211ENST00000460408 TMEM59Q9BXS4 323 aa2.15□□□□□ -2.07
RFC4-211ENST00000460408 DNTTIP1Q9H147 329 aa2.15□□□□□ -2.07
RFC4-211ENST00000460408 MRPL47Q9HD33 250 aaKnown RBP2.15□□□□□ -2.07
RFC4-211ENST00000460408 IKZF2Q9UKS7 526 aa2.15□□□□□ -2.07
RFC4-211ENST00000460408 F11RQ9Y624 299 aaKnown RBP2.15□□□□□ -2.07
RFC4-211ENST00000460408 WSB1Q9Y6I7 421 aa2.15□□□□□ -2.07
RFC4-211ENST00000460408 IKBKGQ9Y6K9 419 aa2.15□□□□□ -2.07
RFC4-211ENST00000460408 LAMB2P55268 1798 aa2.15□□□□□ -2.07
RFC4-211ENST00000460408 CD163L1Q9NR16 1453 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 A0A1B0GVI7 797 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 ZNF726A6NNF4 738 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 UBXN8O00124 270 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 PES1O00541 588 aaKnown RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 PSTPIP1O43586 416 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 MGRN1O60291 552 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 IGLV2-23P01705 113 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 ALDOBP05062 364 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 C2P06681 752 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 UQCRFS1P1P0C7P4 283 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 MCF2P10911 925 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 HPGDP15428 266 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 HNRNPH3P31942 346 aaKnown RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 CASP14P31944 242 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 ATP5C1P36542 298 aaKnown RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 SUB1P53999 127 aaKnown RBP eCLIP2.14□□□□□ -2.07
RFC4-211ENST00000460408 KCNJ2P63252 427 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 RSPO1Q2MKA7 263 aaPredicted RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 ZYG11AQ6WRX3 759 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 Q6ZSR3 168 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 CAMK2N1Q7Z7J9 78 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 NECAB1Q8N987 351 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 Q8N9L7 120 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 DTX3LQ8TDB6 740 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 SLC2A14Q8TDB8 520 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 MCOLN3Q8TDD5 553 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 TMEM158Q8WZ71 300 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 SGK3Q96BR1 496 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 TPD52L3Q96J77 140 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 HSFY1Q96LI6 401 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 CLMPQ9H6B4 373 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 CTPS2Q9NRF8 586 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 ETNK2Q9NVF9 386 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 ZNF226Q9NYT6 803 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 RBAKQ9NYW8 714 aaPredicted RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 NUFIP1Q9UHK0 495 aaKnown RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 PACSIN2Q9UNF0 486 aaPredicted RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 CSDC2Q9Y534 153 aaKnown RBP2.14□□□□□ -2.07
RFC4-211ENST00000460408 SCN7AQ01118 1682 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 VPS8Q8N3P4 1428 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 CACNA1HO95180 2353 aa2.14□□□□□ -2.07
RFC4-211ENST00000460408 USP34Q70CQ2 3546 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 CARMIL3Q8ND23 1372 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 USP24Q9UPU5 2620 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 ZFYVE26Q68DK2 2539 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 CDH23Q9H251 3354 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 ZNF716A6NP11 495 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 GOSR2O14653 212 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 SS18L1O75177 396 aaPredicted RBP2.13□□□□□ -2.07
RFC4-211ENST00000460408 SUPT3HO75486 399 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 SERPIND1P05546 499 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 CSF3P09919 207 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 ZNF735P0CB33 412 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 RPS2P15880 293 aaKnown RBP2.13□□□□□ -2.07
RFC4-211ENST00000460408 RORAP35398 523 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 SLC26A3P40879 764 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 NMUP48645 174 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 CCR6P51684 374 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 SUCLG1P53597 346 aaKnown RBP2.13□□□□□ -2.07
RFC4-211ENST00000460408 ATP5IP56385 69 aaPredicted RBP2.13□□□□□ -2.07
RFC4-211ENST00000460408 ENPEPQ07075 957 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 LRRC74AQ0VAA2 488 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 ARHGAP19Q14CB8 494 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 SSX2Q16385 188 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 RFX4Q33E94 735 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 AGBL2Q5U5Z8 902 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 CNIH2Q6PI25 160 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 LYPD2Q6UXB3 125 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 KDM7AQ6ZMT4 941 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 ASCL5Q7RTU5 278 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 C6orf120Q7Z4R8 191 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 FAM228AQ86W67 206 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 CDH26Q8IXH8 852 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 MS4A15Q8N5U1 240 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 AKR7LQ8NHP1 331 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 PLPPR1Q8TBJ4 325 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 GIMAP1Q8WWP7 306 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 ASB9Q96DX5 294 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 MED8Q96G25 268 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 AURKBQ96GD4 344 aaPredicted RBP2.13□□□□□ -2.07
RFC4-211ENST00000460408 RARRES2Q99969 163 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 PKIBQ9C010 78 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 C11orf49Q9H6J7 331 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 INPP5EQ9NRR6 644 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 KLHL28Q9NXS3 571 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 STOX2Q9P2F5 926 aaPredicted RBP2.13□□□□□ -2.07
RFC4-211ENST00000460408 DEC1Q9P2X7 70 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 GNPTGQ9UJJ9 305 aa2.13□□□□□ -2.07
RFC4-211ENST00000460408 HEBP2Q9Y5Z4 205 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms