RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 SDHAP31040 664 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 IL2RGP31785 369 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 MSX2P35548 267 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-203ENST00000460264 GDI2P50395 445 aaKnown RBP16.18■□□□□ 0.18
COL5A1-203ENST00000460264 KRT72Q14CN4 511 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 TRIP10Q15642 601 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 OR52J3Q8NH60 311 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 HPS1Q92902 700 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 CDRT15Q96T59 188 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 EMC7Q9NPA0 242 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 KRCC1Q9NPI7 259 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-203ENST00000460264 NRIP3Q9NQ35 241 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 HINT3Q9NQE9 182 aaKnown RBP16.18■□□□□ 0.18
COL5A1-203ENST00000460264 SLCO1C1Q9NYB5 712 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 LPAR3Q9UBY5 353 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 IL20RAQ9UHF4 553 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 KCNS2Q9ULS6 477 aa16.18■□□□□ 0.18
COL5A1-203ENST00000460264 C17orf100A8MU93 164 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 ICMTO60725 284 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 ACHEP22303 614 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 COL8A2P25067 703 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 MAGEB1P43366 347 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 MRPS11P82912 194 aaKnown RBP16.17■□□□□ 0.18
COL5A1-203ENST00000460264 GPR139Q6DWJ6 353 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 ZNF774Q6NX45 483 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 TMEM154Q6P9G4 183 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 UGT2A3Q6UWM9 527 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 RFPL4BQ6ZWI9 263 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 SYT9Q86SS6 491 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 ALDH16A1Q8IZ83 802 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 SNX33Q8WV41 574 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 RDH5Q92781 318 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 YIPF5Q969M3 257 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 NSMCE2Q96MF7 247 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 GPA33Q99795 319 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 BEX2Q9BXY8 128 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 SHARPINQ9H0F6 387 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 EIF3KQ9UBQ5 218 aaKnown RBP16.17■□□□□ 0.18
COL5A1-203ENST00000460264 AURKCQ9UQB9 309 aa16.17■□□□□ 0.18
COL5A1-203ENST00000460264 UNC119BA6NIH7 251 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 IGHV3-13P01766 116 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 SMIM11AP58511 58 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 SPIBQ01892 262 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 GLO1Q04760 184 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 SPATS1Q496A3 300 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 SPATA46Q5T0L3 261 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 C16orf89Q6UX73 402 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 UNQ6126/PRO20091Q6UXV3 157 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 ADCK1Q86TW2 530 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 DEFB107AQ8IZN7 70 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 GTF3AQ92664 365 aaKnown RBP16.16■□□□□ 0.18
COL5A1-203ENST00000460264 MARS2Q96GW9 593 aaKnown RBP16.16■□□□□ 0.18
COL5A1-203ENST00000460264 WACQ9BTA9 647 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 SYT4Q9H2B2 425 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 NDE1Q9NXR1 346 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 VSX1Q9NZR4 365 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-203ENST00000460264 CUBNO60494 3623 aa16.16■□□□□ 0.18
COL5A1-203ENST00000460264 SOCS2O14508 198 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 RP2O75695 350 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 GADD45GO95257 159 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 TGFAP01135 160 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 IFNA2P01563 188 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 MPV17P39210 176 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 CCL8P80075 99 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 MXRA7P84157 204 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 PCGF3Q3KNV8 242 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 ZNF718Q3SXZ3 478 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 TMEM255AQ5JRV8 349 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 DPY19L2P2Q6ZN68 376 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 PTCHD4Q6ZW05 846 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 ABHD4Q8TB40 342 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 FANK1Q8TC84 345 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 IPCEF1Q8WWN9 437 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-203ENST00000460264 MCUR1Q96AQ8 359 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 ZNF275Q9NSD4 429 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-203ENST00000460264 NKIRAS2Q9NYR9 191 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 IER3IP1Q9Y5U9 82 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 TANC2Q9HCD6 1990 aa16.15■□□□□ 0.18
COL5A1-203ENST00000460264 IMPA2O14732 288 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 SLC16A7O60669 478 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 TXNDC12O95881 172 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 MT-ND5P03915 603 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 FABP3P05413 133 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 GPR6P46095 362 aaPredicted RBP16.14■□□□□ 0.17
COL5A1-203ENST00000460264 PPP1CBP62140 327 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 SCRN3Q0VDG4 424 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 CCNIQ14094 377 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 MOGQ16653 247 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 FAM120AOSQ5T036 256 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 MBNL2Q5VZF2 373 aaKnown RBP16.14■□□□□ 0.17
COL5A1-203ENST00000460264 SMARCD3Q6STE5 483 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 ZER1Q7Z7L7 766 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 SLC25A40Q8TBP6 338 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 KLF14Q8TD94 323 aaPredicted RBP16.14■□□□□ 0.17
COL5A1-203ENST00000460264 OR2J1Q9GZK6 312 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 IL1RAPQ9NPH3 570 aa16.14■□□□□ 0.17
COL5A1-203ENST00000460264 NDRG4Q9ULP0 352 aaKnown RBP16.14■□□□□ 0.17
COL5A1-203ENST00000460264 H3BSA7 217 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 DOK2O60496 412 aa16.13■□□□□ 0.17
COL5A1-203ENST00000460264 KHDRBS3O75525 346 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms