RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 GAAP10253 952 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 DSCR9P59020 149 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 TEKQ02763 1124 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 ENDOGQ14249 297 aaKnown RBP9.29□□□□□ -0.92
UBR4-208ENST00000459947 PABPC1L2AQ5JQF8 200 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 SLX4IPQ5VYV7 408 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 C22orf34Q6ZV56 151 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 TMEM179BQ7Z7N9 219 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 GID4Q8IVV7 300 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 PACRGLQ8N7B6 248 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 SLC26A10Q8NG04 563 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 C11orf40Q8WZ69 217 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 SH3GL3Q99963 347 aa9.29□□□□□ -0.92
UBR4-208ENST00000459947 H2AFY2Q9P0M6 372 aaPredicted RBP9.29□□□□□ -0.92
UBR4-208ENST00000459947 BOD1L1Q8NFC6 3051 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 SNTNA6NMZ2 147 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ATP6V1G2-DDX39BF2Z307 99 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 H7C1C5 153 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 GLCEO94923 617 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 SOX14O95416 240 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 TP53P04637 393 aaPredicted RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 TTKP33981 857 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 LCN6P62502 163 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ICA1LQ8NDH6 482 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 OR4Q3Q8NH05 313 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 PYDC1Q8WXC3 89 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ZNF75AQ96N20 296 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ZNF416Q9BWM5 594 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 PLA2G12AQ9BZM1 189 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 VCXQ9H320 206 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 TOR3AQ9H497 397 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ZNF701Q9NV72 531 aaPredicted RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 RAI1Q7Z5J4 1906 aaPredicted RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 ZNF35P13682 527 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 LIPAP38571 399 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ENTPD1P49961 510 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 PPOXP50336 477 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ALDH3A2P51648 485 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 IST1P53990 364 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 CDC42P60953 191 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 TUBA1BP68363 451 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 TUBA4AP68366 448 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 HIST1H3AP68431 136 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ZMAT1Q5H9K5 638 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 HIST2H3PS2Q5TEC6 136 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 HIST2H3AQ71DI3 136 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 TUBA1AQ71U36 451 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 AMIGO2Q86SJ2 522 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 DDOQ99489 341 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 CXXC4Q9H2H0 198 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 RERGLQ9H628 205 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 CYSLTR2Q9NS75 346 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 SLCO1C1Q9NYB5 712 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 ZNF224Q9NZL3 707 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 DOK2O60496 412 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 STOMP27105 288 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 DAPP51397 102 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 PPP1R8Q12972 351 aaKnown RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 SNTB2Q13425 540 aaKnown RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 RGS7BPQ6MZT1 257 aaPredicted RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 RHOUQ7L0Q8 258 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 MUC15Q8N387 334 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 TRUB1Q8WWH5 349 aaKnown RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 C1QTNF6Q9BXI9 259 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 SRA1Q9HD15 236 aaKnown RBP9.28□□□□□ -0.92
UBR4-208ENST00000459947 IL20RAQ9UHF4 553 aa9.28□□□□□ -0.92
UBR4-208ENST00000459947 TENM4Q6N022 2769 aa9.27□□□□□ -0.92
UBR4-208ENST00000459947 E7EQL1 145 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 PHYHO14832 338 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 MPZL2O60487 215 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 DANCRP0C864 163 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 NKX6-1P78426 367 aaPredicted RBP9.27□□□□□ -0.93
UBR4-208ENST00000459947 PIGFQ07326 219 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 CRMP1Q14194 572 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 SNCBQ16143 134 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 SNAPC1Q16533 368 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 ELFN2Q5R3F8 820 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 SLC35F1Q5T1Q4 408 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 WDFY1Q8IWB7 410 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 LRRC18Q8N456 261 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 OPA3Q9H6K4 179 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 MARCH7Q9H992 704 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 CA10Q9NS85 328 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 TBCCD1Q9NVR7 557 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 PLEK2Q9NYT0 353 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 OAZ3Q9UMX2 235 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 NOP16Q9Y3C1 178 aaKnown RBP9.27□□□□□ -0.93
UBR4-208ENST00000459947 OR6C68A6NDL8 312 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 H7C417 338 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 SURF4O15260 269 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 SPI1P17947 270 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 PPP2R2BQ00005 443 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 POU4F2Q12837 409 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 OR1F12Q8NHA8 337 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 SNX33Q8WV41 574 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 SPTSSAQ969W0 71 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 WNT5BQ9H1J7 359 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 NIPAL2Q9H841 368 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 NOX3Q9HBY0 568 aa9.27□□□□□ -0.93
UBR4-208ENST00000459947 TMEM14AQ9Y6G1 99 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms