RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 PAQR4Q8N4S7 273 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 NPEPL1Q8NDH3 523 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 OR1J1Q8NGS3 322 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 OR51A7Q8NH64 312 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 MARS2Q96GW9 593 aaKnown RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 C7orf34Q96L11 122 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 NRIP3Q9NQ35 241 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 POLE4Q9NR33 117 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 TBCCD1Q9NVR7 557 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 VSX1Q9NZR4 365 aaPredicted RBP8.56□□□□□ -1.04
HDLBP-228ENST00000459788 NDUFAF4Q9P032 175 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 TAAR3PQ9P1P4 343 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 MAGEL2Q9UJ55 1249 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 ZDHHC8Q9ULC8 765 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 SIGLEC7Q9Y286 467 aa8.56□□□□□ -1.04
HDLBP-228ENST00000459788 LOC100509620A0A075B734 347 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 IGKV1D-43A0A0B4J1Z2 117 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 TEX13CA0A0J9YWL9 993 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 PLSCR5A0PG75 271 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 CDC42EP2O14613 210 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 RP2O75695 350 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 DCTN3O75935 186 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 HPXP02790 462 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 FAM157BP0CG42 384 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 LAP3P28838 519 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 CDAP32320 146 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 YAP1P46937 504 aaKnown RBP8.55□□□□□ -1.04
HDLBP-228ENST00000459788 RPS6KA3P51812 740 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 SEC24CP53992 1094 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 SLC3A1Q07837 685 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 SF3A3Q12874 501 aaKnown RBP eCLIP8.55□□□□□ -1.045e-6■■■■■ 28.7
HDLBP-228ENST00000459788 TOP3AQ13472 1001 aaPredicted RBP8.55□□□□□ -1.04
HDLBP-228ENST00000459788 AQP6Q13520 282 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 KCNMB1Q16558 191 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 SAMD4BQ5PRF9 694 aaKnown RBP8.55□□□□□ -1.04
HDLBP-228ENST00000459788 TSEN54Q7Z6J9 526 aaKnown RBP8.55□□□□□ -1.04
HDLBP-228ENST00000459788 PGAM4Q8N0Y7 254 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 LINC00471Q8N535 108 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 OR13C2Q8NGS9 318 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 NSMAFQ92636 917 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 PYURFQ96I23 114 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF570Q96NI8 536 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 DCLRE1CQ96SD1 692 aaKnown RBP8.55□□□□□ -1.04
HDLBP-228ENST00000459788 FUZQ9BT04 418 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 EGLN1Q9GZT9 426 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 WNT5BQ9H1J7 359 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 TPK1Q9H3S4 243 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 MYEF2Q9P2K5 600 aaKnown RBP8.55□□□□□ -1.04
HDLBP-228ENST00000459788 RHCGQ9UBD6 479 aa8.55□□□□□ -1.04
HDLBP-228ENST00000459788 IGHV1-69-2A0A0G2JMI3 117 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 C5orf49A4QMS7 147 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ARPC3O15145 178 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 IDH3BO43837 385 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 KHDRBS3O75525 346 aaKnown RBP8.54□□□□□ -1.04
HDLBP-228ENST00000459788 CLPTM1O96005 669 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 SEMG1P04279 462 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 CD55P08174 381 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 NAT2P11245 290 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 GSTM3P21266 225 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 COL8A2P25067 703 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 CRABP1P29762 137 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 IFNGR2P38484 337 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 WNT5AP41221 380 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 OMPP47874 163 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 RGS6P49758 472 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 MMP15P51511 669 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ERVK-25P63136 954 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ENDOGQ14249 297 aaKnown RBP8.54□□□□□ -1.04
HDLBP-228ENST00000459788 CR1LQ2VPA4 569 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 MESTQ5EB52 335 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 MTX3Q5HYI7 312 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 DNM1P34Q6PK57 102 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 C16orf89Q6UX73 402 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 PIGWQ7Z7B1 504 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 GLCCI1Q86VQ1 547 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 GLB1L2Q8IW92 636 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ARHGAP24Q8N264 748 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 KLF14Q8TD94 323 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-228ENST00000459788 MCUR1Q96AQ8 359 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ELMOD3Q96FG2 381 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 TIMD4Q96H15 378 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 RSRC1Q96IZ7 334 aaKnown RBP8.54□□□□□ -1.04
HDLBP-228ENST00000459788 C4orf45Q96LM5 186 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 Q96M85 177 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 LRRC37BQ96QE4 947 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ZNF275Q9NSD4 429 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-228ENST00000459788 DECR2Q9NUI1 292 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ADA2Q9NZK5 511 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 CD300AQ9UGN4 299 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 TMEFF2Q9UIK5 374 aaPredicted RBP8.54□□□□□ -1.04
HDLBP-228ENST00000459788 KLHL21Q9UJP4 597 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 AURKCQ9UQB9 309 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 ARL2BPQ9Y2Y0 163 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 FBN3Q75N90 2809 aa8.54□□□□□ -1.04
HDLBP-228ENST00000459788 A0A0A6YYJ9 748 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 TRAV20A0A0B4J274 112 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 A0A1W2PPL8 197 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 LRP5LA4QPB2 252 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 UNC119BA6NIH7 251 aa8.53□□□□□ -1.04
HDLBP-228ENST00000459788 RNF212BA8MTL3 300 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms