RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 C5orf49A4QMS7 147 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 TXNDC12O95881 172 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 APEHP13798 732 aaKnown RBP13.82□□□□□ -0.2
COL7A1-203ENST00000459756 CCNOP22674 350 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 FPR3P25089 353 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 GZMKP49863 264 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 FXYD6P3P58550 94 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 ENDOGQ14249 297 aaKnown RBP13.82□□□□□ -0.2
COL7A1-203ENST00000459756 MAD2L1BPQ15013 274 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-203ENST00000459756 NKPD1Q17RQ9 610 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 ZER1Q7Z7L7 766 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 ZDHHC21Q8IVQ6 265 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 C1orf174Q8IYL3 243 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 RASD2Q96D21 266 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 GPA33Q99795 319 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 ZNF416Q9BWM5 594 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 BPESC1Q9GZL8 116 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 WNT5BQ9H1J7 359 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 MUC13Q9H3R2 512 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 VSX1Q9NZR4 365 aaPredicted RBP13.82□□□□□ -0.2
COL7A1-203ENST00000459756 IL20RAQ9UHF4 553 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 IER3IP1Q9Y5U9 82 aa13.82□□□□□ -0.2
COL7A1-203ENST00000459756 IGHV4-61A0A0C4DH41 118 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 SOCS2O14508 198 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 OR10H3O60404 316 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 KHDRBS3O75525 346 aaKnown RBP13.81□□□□□ -0.2
COL7A1-203ENST00000459756 KRT36O76013 467 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 CLPTM1O96005 669 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 IGHV4-31P0DP07 118 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 NAT2P11245 290 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 CTLA4P16410 223 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 ZNF23P17027 643 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 RRM2P31350 389 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 ERVS71-1P61550 626 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 SCRN3Q0VDG4 424 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 MOGQ16653 247 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 RFX4Q33E94 735 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 DNAL1Q4LDG9 190 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 CYP2R1Q6VVX0 501 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 GLB1L2Q8IW92 636 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 ICA1LQ8NDH6 482 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 OR1J1Q8NGS3 322 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 FANK1Q8TC84 345 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 SNX33Q8WV41 574 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 C1orf21Q9H246 121 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 SYT4Q9H2B2 425 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 EMC7Q9NPA0 242 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 TAAR3PQ9P1P4 343 aa13.81□□□□□ -0.2
COL7A1-203ENST00000459756 NDRG4Q9ULP0 352 aaKnown RBP13.81□□□□□ -0.2
COL7A1-203ENST00000459756 PRPF19Q9UMS4 504 aaKnown RBP13.81□□□□□ -0.2
COL7A1-203ENST00000459756 IMPA2O14732 288 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 SLC16A7O60669 478 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 ICMTO60725 284 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 IGHV3-13P01766 116 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 MT-ND5P03915 603 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 SCG5P05408 212 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 ATP6V1B2P21281 511 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 SLC6A6P31641 620 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 WNT5AP41221 380 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 MRPS11P82912 194 aaKnown RBP13.8□□□□□ -0.2
COL7A1-203ENST00000459756 BNIP1Q12981 228 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 RIN1Q13671 783 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 ZNF774Q6NX45 483 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 C1orf94Q6P1W5 598 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 UGT2A3Q6UWM9 527 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 HIPK1Q86Z02 1210 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 ZNF101Q8IZC7 436 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 POP5Q969H6 163 aaKnown RBP13.8□□□□□ -0.2
COL7A1-203ENST00000459756 SLC7A6OSQ96CW6 309 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-203ENST00000459756 ERMAPQ96PL5 475 aaPredicted RBP13.8□□□□□ -0.2
COL7A1-203ENST00000459756 BTBD10Q9BSF8 475 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 OR52D1Q9H346 318 aa13.8□□□□□ -0.2
COL7A1-203ENST00000459756 HINT3Q9NQE9 182 aaKnown RBP13.8□□□□□ -0.2
COL7A1-203ENST00000459756 C17orf100A8MU93 164 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 ARPC3O15145 178 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 PPP1R3DO95685 299 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 HPXP02790 462 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 TACSTD2P09758 323 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 COX5BP10606 129 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 CRABP1P29762 137 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 GCH1P30793 250 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 MAGEA2P43356 314 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 GSSP48637 474 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 CHN2P52757 468 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 HMGA2P52926 109 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 LSM6P62312 80 aaKnown RBP13.79□□□□□ -0.2
COL7A1-203ENST00000459756 AQP6Q13520 282 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 PCGF3Q3KNV8 242 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 ZNF718Q3SXZ3 478 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 ELFN2Q5R3F8 820 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 LCN8Q6JVE9 175 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 TMEM154Q6P9G4 183 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 DNM1P34Q6PK57 102 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 ARL9Q6T311 187 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 PTCHD4Q6ZW05 846 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 DHFR2Q86XF0 187 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 PRIMA1Q86XR5 153 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 LINC00471Q8N535 108 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 GNPDA2Q8TDQ7 276 aa13.79□□□□□ -0.2
COL7A1-203ENST00000459756 RDH5Q92781 318 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms