RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 WNT11O96014 354 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 PDGFAP04085 211 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 RLN1P04808 185 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 RPA2P15927 270 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 HSD11B1P28845 292 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 CALCRP30988 508 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 S100A11P31949 105 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 PTGS2P35354 604 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 EIF1AXP47813 144 aaKnown RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SELENOPP49908 381 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 ZNF41P51814 821 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 AFF3P51826 1226 aaKnown RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SEC61A1P61619 476 aaKnown RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 RNF4P78317 190 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 INSM1Q01101 510 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SQSTM1Q13501 440 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 DEFB133Q30KQ1 61 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 C2orf76Q3KRA6 126 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 ACTBL2Q562R1 376 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SLC25A53Q5H9E4 307 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 TOR2AQ5JU69 321 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 RHBDD2Q6NTF9 364 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 C11orf88Q6PI97 169 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 TSSK4Q6SA08 328 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 Q6ZTK2 550 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SLC36A1Q7Z2H8 476 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 COMMD7Q86VX2 200 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 PRR22Q8IZ63 422 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SHISA5Q8N114 240 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 GABRG1Q8N1C3 465 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 FAM160A2Q8N612 972 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 ZNF321PQ8N8H1 164 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 CLEC1AQ8NC01 280 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 CCDC54Q8NEL0 328 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SLC26A10Q8NG04 563 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 OR2AK2Q8NG84 335 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 OR51D1Q8NGF3 324 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 OR1J4Q8NGS1 313 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 OR1L3Q8NH93 324 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 LRRC20Q8TCA0 184 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SLC22A8Q8TCC7 542 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SLC25A43Q8WUT9 341 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 ASB5Q8WWX0 329 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 ASB10Q8WXI3 467 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 ELMOD3Q96FG2 381 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 SLC25A44Q96H78 314 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 IER2Q9BTL4 223 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 DUSP23Q9BVJ7 150 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 DPCDQ9BVM2 203 aaPredicted RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 CHST11Q9NPF2 352 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 PRDM6Q9NQX0 595 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 FGF21Q9NSA1 209 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 MRPL15Q9P015 296 aaKnown RBP7.95□□□□□ -1.14
HDAC3-202ENST00000459727 FBLN5Q9UBX5 448 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 OPN4Q9UHM6 478 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 PFDN2Q9UHV9 154 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 OR52A1Q9UKL2 312 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 RAB22AQ9UL26 194 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 GTF2A1LQ9UNN4 478 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 PLEKHA6Q9Y2H5 1048 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 LRP12Q9Y561 859 aa7.95□□□□□ -1.14
HDAC3-202ENST00000459727 TMEM265A0A087WTH1 108 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 IGLV3-32A0A0A0MS00 114 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 A0A0D9SG52 128 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 TMEM272A0A1B0GTI8 110 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 LOC107986453A0A1B0GWG9 222 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 TMEM82A0PJX8 343 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ZNF736B4DX44 427 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-202ENST00000459727 KRBOX1C9JBD0 128 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 MCRIP1C9JLW8 97 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 PYCARD-AS1I3L0S3 204 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ONECUT2O95948 504 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 CD74P04233 296 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ITGB2P05107 769 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ITGA5P08648 1049 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 H2BFMP0C1H6 154 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 UBBP0CG47 229 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 CTLA4P16410 223 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ANXA7P20073 488 aaKnown RBP7.94□□□□□ -1.14
HDAC3-202ENST00000459727 RPS27AP62979 156 aaKnown RBP7.94□□□□□ -1.14
HDAC3-202ENST00000459727 UBA52P62987 128 aaKnown RBP7.94□□□□□ -1.14
HDAC3-202ENST00000459727 HSF1Q00613 529 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 TLE3Q04726 772 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ARL6IP1Q15041 203 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 C4orf46Q504U0 113 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 THEM4Q5T1C6 240 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 SIGIRRQ6IA17 410 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 OR7E24Q6IFN5 339 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 RFPL4BQ6ZWI9 263 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 OR2W3Q7Z3T1 314 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 BPHLQ86WA6 291 aaPredicted RBP7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ZNF584Q8IVC4 421 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 SLC22A24Q8N4F4 322 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 ZDHHC22Q8N966 263 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 DTWD2Q8NBA8 298 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 CEP76Q8TAP6 659 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 SCARB1Q8WTV0 552 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 RNF138Q8WVD3 245 aa7.94□□□□□ -1.14
HDAC3-202ENST00000459727 RNF133Q8WVZ7 376 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms