RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 PIGMQ9H3S5 423 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 SFXN1Q9H9B4 322 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 OBP2AQ9NY56 170 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 TAS2R3Q9NYW6 316 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 NDRG3Q9UGV2 375 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 MRTO4Q9UKD2 239 aaKnown RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 CDV3Q9UKY7 258 aaKnown RBP7.68□□□□□ -1.18
VPS50-208ENST00000458707 TMEM14AQ9Y6G1 99 aa7.68□□□□□ -1.18
VPS50-208ENST00000458707 SPTBN5Q9NRC6 3674 aaKnown RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 KANTRA0A1W2PQU2 76 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 OR5H14A6NHG9 310 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 GRXCR1A8MXD5 290 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 OR10H2O60403 315 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 AKR7A3O95154 331 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CD74P04233 296 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 ZNF735P0CB33 412 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 RNF224P0DH78 156 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 PNMTP11086 282 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 ACHEP22303 614 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CTHP32929 405 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CTNNB1P35222 781 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 ACTR1BP42025 376 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 WASP42768 502 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CAPZA1P52907 286 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 TAS2R60P59551 318 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CTXN1P60606 82 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CHAF1BQ13112 559 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 RAB11BQ15907 218 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 ALG10Q5BKT4 473 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 VWA2Q5GFL6 755 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 ZNF776Q68DI1 518 aaPredicted RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 WBP2NLQ6ICG8 309 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 C11orf87Q6NUJ2 197 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CFAP161Q6P656 301 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 TMEM205Q6UW68 189 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 ATG4DQ86TL0 474 aaPredicted RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 BEST3Q8N1M1 668 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 BPIFCQ8NFQ6 507 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 STEAP2Q8NFT2 490 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 OR1E3Q8WZA6 343 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 DVL3Q92997 716 aaPredicted RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 TCEAL3Q969E4 200 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CPNE4Q96A23 557 aaPredicted RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 SEH1LQ96EE3 360 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 GPR61Q9BZJ8 451 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 FAM117AQ9C073 453 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 CAPN10Q9HC96 672 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 MMP25Q9NPA2 562 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 GDE1Q9NZC3 331 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 IKZF2Q9UKS7 526 aa7.67□□□□□ -1.18
VPS50-208ENST00000458707 RANBP2P49792 3224 aaKnown RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 PHF3Q92576 2039 aaKnown RBP7.67□□□□□ -1.18
VPS50-208ENST00000458707 THADAQ6YHU6 1953 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 A0A0A6YYH2 397 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 RNF222A6NCQ9 220 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 MEIS3P1A6NDR6 274 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 A6NJ64 397 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 TMEM200CA6NKL6 621 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ELOA3DA6NLF2 546 aaPredicted RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 BLOC1S5-TXNDC5H3BN57 136 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 GPR37O15354 613 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ATG12O94817 140 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 RAB3DO95716 219 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 PLATP00750 562 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 CT45A8P0DMV1 189 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 CT45A9P0DMV2 189 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 FCARP24071 287 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 GPX4P36969 197 aaPredicted RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 LSSP48449 732 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 AKR1D1P51857 326 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 IGLV3-21P80748 117 aaPredicted RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 DHRS2Q13268 280 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 RUNX3Q13761 415 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 NR0B2Q15466 257 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.66□□□□□ -1.18
VPS50-208ENST00000458707 ITPRIPL2Q3MIP1 535 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ELOA3BQ3SY89 546 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 KLHL26Q53HC5 615 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 PAN3Q58A45 887 aaKnown RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 CT45A2Q5DJT8 189 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 MESTQ5EB52 335 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 WDR38Q5JTN6 314 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 THEM4Q5T1C6 240 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ATPAF1Q5TC12 328 aaPredicted RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 ARHGAP40Q5TG30 622 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 FNDC7Q5VTL7 733 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ASPHD2Q6ICH7 369 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ENPP7Q6UWV6 458 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ACOT7LQ6ZUV0 252 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR2W3Q7Z3T1 314 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ELOA3Q8NG57 546 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OR14C36Q8NHC7 312 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 OIT3Q8WWZ8 545 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 ZNF285Q96NJ3 590 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 INTS14Q96SY0 518 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 SRA1Q9HD15 236 aaKnown RBP7.66□□□□□ -1.18
VPS50-208ENST00000458707 Q9N2J8 555 aa7.66□□□□□ -1.18
VPS50-208ENST00000458707 LRIT1Q9P2V4 623 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms