RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 ARHGDIBP52566 201 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 EIF2B1Q14232 305 aaKnown RBP12.72□□□□□ -0.37
SCFD1-203ENST00000458591 NKPD1Q17RQ9 610 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 SLC22A6Q4U2R8 563 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 KIAA0895LQ68EN5 471 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 TMEM225Q6GV28 225 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 LIN54Q6MZP7 749 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 KRT77Q7Z794 578 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 C9orf40Q8IXQ3 194 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 ZNF721Q8TF20 911 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 ASB5Q8WWX0 329 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 C8orf44Q96CB5 159 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 CMBLQ96DG6 245 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 MICU1Q9BPX6 476 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 WBP1LQ9NX94 342 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 TAS2R8Q9NYW2 309 aa12.72□□□□□ -0.37
SCFD1-203ENST00000458591 COA3Q9Y2R0 106 aaPredicted RBP12.72□□□□□ -0.37
SCFD1-203ENST00000458591 LOC100289279A0A1B0GTE1 492 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 A0A1B0GW55 424 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 SLC22A23A1A5C7 686 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 PRSS37A4D1T9 235 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 SLC17A2O00624 439 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DDAH2O95865 285 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DUX4L2P0CJ85 424 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DUX4L3P0CJ86 424 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DUX4L4P0CJ87 422 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DUX4L5P0CJ88 424 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DUX4L6P0CJ89 424 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DUX4L7P0CJ90 424 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 MYF5P13349 255 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 CAPZBP47756 277 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 RASGEF1BQ0VAM2 473 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 BIKQ13323 160 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 LRRC37A5PQ49AS3 106 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 LY6G6FQ5SQ64 297 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 ATRAIDQ6UW56 229 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 PDZD9Q8IXQ8 264 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 LMX1AQ8TE12 382 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 SLC38A3Q99624 504 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 CMKLR1Q99788 373 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 ABHD6Q9BV23 337 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 WDR13Q9H1Z4 485 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DUX4Q9UBX2 424 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 DHDHQ9UQ10 334 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 LRP12Q9Y561 859 aa12.71□□□□□ -0.37
SCFD1-203ENST00000458591 WIPF3A6NGB9 483 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 SOX1O00570 391 aaPredicted RBP12.71□□□□□ -0.38
SCFD1-203ENST00000458591 TOR1AO14656 332 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 DRD1P21728 446 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 MRPS21P82921 87 aaKnown RBP12.71□□□□□ -0.38
SCFD1-203ENST00000458591 DEFB133Q30KQ1 61 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 SCGB2B2Q4G0G5 96 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 EMC4Q5J8M3 183 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 FAM166AQ6J272 317 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 CORO6Q6QEF8 472 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 HSD17B13Q7Z5P4 300 aaPredicted RBP12.71□□□□□ -0.38
SCFD1-203ENST00000458591 CD163Q86VB7 1156 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 ZNF679Q8IYX0 411 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 BOLLQ8N9W6 283 aaKnown RBP12.71□□□□□ -0.38
SCFD1-203ENST00000458591 OR1J2Q8NGS2 313 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 OR1S1Q8NH92 325 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 GPX8Q8TED1 209 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 KLHDC7BQ96G42 594 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 SEC22AQ96IW7 307 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 MFFQ9GZY8 342 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 DUSP15Q9H1R2 295 aaPredicted RBP12.71□□□□□ -0.38
SCFD1-203ENST00000458591 EMC9Q9Y3B6 208 aa12.71□□□□□ -0.38
SCFD1-203ENST00000458591 IGLV1-36A0A0B4J1U3 117 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 IGKV1D-43A0A0B4J1Z2 117 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 A0A1W2PPC1 479 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 EIF1AYO14602 144 aaKnown RBP12.7□□□□□ -0.38
SCFD1-203ENST00000458591 AMY2AP04746 511 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 FGF2P09038 288 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 OR4E1P0C645 316 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 SCAND1P57086 179 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 ZNF273Q14593 569 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 SMAD2Q15796 467 aaKnown RBP12.7□□□□□ -0.38
SCFD1-203ENST00000458591 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-203ENST00000458591 C1orf189Q5VU69 101 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 LRFN4Q6PJG9 635 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 TFAP2EQ6VUC0 442 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 RNF144BQ7Z419 303 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 ACBD4Q8NC06 268 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 BVESQ8NE79 360 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 RNF128Q8TEB7 428 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 ASB13Q8WXK3 278 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 SLC25A44Q96H78 314 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-203ENST00000458591 MNTQ99583 582 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 LAT2Q9GZY6 243 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 LDAHQ9H6V9 325 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 EPHA6Q9UF33 1036 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 ATXN7L1Q9ULK2 861 aaPredicted RBP12.7□□□□□ -0.38
SCFD1-203ENST00000458591 PLCL2Q9UPR0 1127 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 TMEM14AQ9Y6G1 99 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 TMEM235A6NFC5 223 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 AQP8O94778 261 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 RAB3DO95716 219 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 IGKV3-11P04433 115 aa12.7□□□□□ -0.38
SCFD1-203ENST00000458591 HTR2CP28335 458 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms