RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 YIPF3Q9GZM5 350 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 NDEL1Q9GZM8 345 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 FAM192AQ9GZU8 254 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 POLE4Q9NR33 117 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 NDUFB11Q9NX14 153 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 ZNF224Q9NZL3 707 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 MOKQ9UQ07 419 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 ERGIC3Q9Y282 383 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 CAB39Q9Y376 341 aaPredicted RBP7.69□□□□□ -1.18
RIF1-208ENST00000457745 PIEZO2Q9H5I5 2752 aa7.69□□□□□ -1.18
RIF1-208ENST00000457745 TLN1Q9Y490 2541 aaKnown RBP7.69□□□□□ -1.18
RIF1-208ENST00000457745 IRGMA1A4Y4 181 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 SMIM30A4D0T7 59 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 CD8B2A6NJW9 211 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 SLC22A20A6NK97 555 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ZNF726A6NNF4 738 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ZNF670-ZNF695F2Z2N8 137 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 H3BSH0 61 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 RER1O15258 196 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 LMX1BO60663 402 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 RPP14O95059 124 aaKnown RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 VAMP5O95183 116 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 HLA-DQA2P01906 255 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 CD8BP10966 210 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ZNF182P17025 639 aaPredicted RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 RPS11P62280 158 aaKnown RBP eCLIP7.68□□□□□ -1.18
RIF1-208ENST00000457745 SIRPAP78324 504 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ADAM8P78325 824 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 HGFACQ04756 655 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 EIF2B1Q14232 305 aaKnown RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 KCNMB1Q16558 191 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 RSPO1Q2MKA7 263 aaPredicted RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 CEACAM16Q2WEN9 425 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 DMKNQ6E0U4 476 aaPredicted RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 OR7E24Q6IFN5 339 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 RPUSD3Q6P087 351 aaKnown RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 VWA1Q6PCB0 445 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ARL9Q6T311 187 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 DCXRQ7Z4W1 244 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 P2RY8Q86VZ1 359 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ZGRF1Q86YA3 2104 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 GLB1L2Q8IW92 636 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 PRSS35Q8N3Z0 413 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 OR6N1Q8NGY5 312 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 THEM6Q8WUY1 208 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 SLC7A6Q92536 515 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 SNRNP40Q96DI7 357 aaKnown RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 FBXO17Q96EF6 278 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ZHX1-C8orf76Q96EF9 292 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ADAD1Q96M93 576 aaKnown RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 SH3GL3Q99963 347 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 SOX7Q9BT81 388 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ZNF416Q9BWM5 594 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 C12orf49Q9H741 205 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 SEC61A2Q9H9S3 476 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 RNF122Q9H9V4 155 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 BCO1Q9HAY6 547 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 GPR35Q9HC97 309 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 ASF1BQ9NVP2 202 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 BABAM2Q9NXR7 383 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 GNG8Q9UK08 70 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 SLC22A13Q9Y226 551 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 RCE1Q9Y256 329 aa7.68□□□□□ -1.18
RIF1-208ENST00000457745 MAP1BP46821 2468 aaKnown RBP7.68□□□□□ -1.18
RIF1-208ENST00000457745 PKD1L2Q7Z442 2459 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 LOC100506127A0A0U1RQW1 187 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 SNTNA6NMZ2 147 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 CCRL2O00421 344 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 PIN1P1O15428 100 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 OGG1O15527 345 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 AKAP8O43823 692 aaKnown RBP7.67□□□□□ -1.18
RIF1-208ENST00000457745 LILRA1O75019 489 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 SLC43A1O75387 559 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 SYNGR4O95473 234 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 B4GALT1P15291 398 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 CELP19835 753 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 CRABP1P29762 137 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 TMBIM6P55061 237 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 ACTC1P68032 377 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 ACTA1P68133 377 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 TUBA1BP68363 451 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 ROR2Q01974 943 aaKnown RBP7.67□□□□□ -1.18
RIF1-208ENST00000457745 SLC3A1Q07837 685 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 ACSM1Q08AH1 577 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 POU4F2Q12837 409 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 NFATC3Q12968 1075 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 LY6DQ14210 128 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 CDK5R1Q15078 307 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 TSC22D1Q15714 1073 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 SGCAQ16586 387 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 CCDC92Q53HC0 331 aaPredicted RBP7.67□□□□□ -1.18
RIF1-208ENST00000457745 WDR38Q5JTN6 314 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 TEX30Q5JUR7 227 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 THEM4Q5T1C6 240 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 LIPNQ5VXI9 398 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 ASPHD2Q6ICH7 369 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 ZNF585AQ6P3V2 769 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 KLHL24Q6TFL4 600 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 TUBA1AQ71U36 451 aa7.67□□□□□ -1.18
RIF1-208ENST00000457745 NAA40Q86UY6 237 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms