RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 ATP6V1G2-DDX39BF2Z307 99 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 GYPBP06028 91 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 ZNF35P13682 527 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 GGT2P36268 569 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 CENPAP49450 140 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 RAD23AP54725 363 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 PCBD1P61457 104 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 TEKQ02763 1124 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 AQP6Q13520 282 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 SNAPC1Q16533 368 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 MEP1BQ16820 701 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 ZNF672Q499Z4 452 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-215ENST00000457039 PABPC1L2AQ5JQF8 200 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 PLBD1Q6P4A8 553 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 LYPD4Q6UWN0 246 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 B3GLCTQ6Y288 498 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 PIAS4Q8N2W9 510 aaPredicted RBP12.25□□□□□ -0.45
SMPD4-215ENST00000457039 CPEB3Q8NE35 698 aaKnown RBP12.25□□□□□ -0.45
SMPD4-215ENST00000457039 IL17RDQ8NFM7 739 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 AKAP1Q92667 903 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMPD4-215ENST00000457039 NRGNQ92686 78 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 MBOAT4Q96T53 435 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 GRIP2Q9C0E4 1043 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 LIME1Q9H400 295 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 DCLRE1BQ9H816 532 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 RNF121Q9H920 327 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 CCNB1IP1Q9NPC3 277 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 MOKQ9UQ07 419 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 TIMM10BQ9Y5J6 103 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 LHFPL6Q9Y693 200 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 PDZD2O15018 2839 aa12.25□□□□□ -0.45
SMPD4-215ENST00000457039 PRR23D1E9PI22 279 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-215ENST00000457039 DLGAP1O14490 977 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 HS3ST1O14792 307 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 CASQ2O14958 399 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PRKYO43930 277 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 CRYAAP02489 173 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 ROS1P08922 2347 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PRR23D2P0DMB1 279 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PSKH1P11801 424 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PAICSP22234 425 aaKnown RBP12.24□□□□□ -0.45
SMPD4-215ENST00000457039 SLC2A5P22732 501 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PEX2P28328 305 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 HIST1H3AP68431 136 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 SCRN3Q0VDG4 424 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 TRIP10Q15642 601 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PCK2Q16822 640 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 HIST2H3PS2Q5TEC6 136 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 LPCAT4Q643R3 524 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 SLC22A25Q6T423 547 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 HIST2H3AQ71DI3 136 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 CPOQ8IVL8 374 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 BBS1Q8NFJ9 593 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 AKR7LQ8NHP1 331 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PLEKHA8Q96JA3 519 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 PRRG3Q9BZD7 231 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 C1orf198Q9H425 327 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 ASH2LQ9UBL3 628 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 NKX1-2Q9UD57 310 aaPredicted RBP12.24□□□□□ -0.45
SMPD4-215ENST00000457039 ORC6Q9Y5N6 252 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 COMMD3-BMI1R4GMX3 469 aa12.24□□□□□ -0.45
SMPD4-215ENST00000457039 POLQO75417 2590 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 TVP23AA6NH52 213 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 E7EQL1 145 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 M0R129 80 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 PRODHO43272 600 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 GLCEO94923 617 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 SNAP29O95721 258 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 FMO3P31513 532 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 BLVRAP53004 296 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 CDH11P55287 796 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 HGFACQ04756 655 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 PLP2Q04941 152 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 ZIK1Q3SY52 487 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-215ENST00000457039 CCDC92Q53HC0 331 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-215ENST00000457039 TEX30Q5JUR7 227 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 OGFRL1Q5TC84 451 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-215ENST00000457039 AADACL4Q5VUY2 407 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 ZNF774Q6NX45 483 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 PAMR1Q6UXH9 720 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 CXXC5Q7LFL8 322 aaKnown RBP12.23□□□□□ -0.45
SMPD4-215ENST00000457039 DEPDC4Q8N2C3 294 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 PAQR4Q8N4S7 273 aaPredicted RBP12.23□□□□□ -0.45
SMPD4-215ENST00000457039 ZNF611Q8N823 705 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 ZNF511Q8NB15 262 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 SLC30A7Q8NEW0 376 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 NUP37Q8NFH4 326 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 OR10H5Q8NGA6 315 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 TMEM163Q8TC26 289 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 IGFBPL1Q8WX77 278 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 HRASLS5Q96KN8 279 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 POM121L2Q96KW2 1035 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 PITX2Q99697 317 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 OR51V1Q9H2C8 321 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 TOR3AQ9H497 397 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 WDR76Q9H967 626 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 MARCH7Q9H992 704 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 UBTD1Q9HAC8 227 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 CYB5R1Q9UHQ9 305 aa12.23□□□□□ -0.45
SMPD4-215ENST00000457039 KCNG2Q9UJ96 466 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms