RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 KHDRBS3O75525 346 aaKnown RBP13.92□□□□□ -0.18
CPSF6-203ENST00000456847 CLPTM1O96005 669 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 NAT2P11245 290 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 CTLA4P16410 223 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 SLC6A6P31641 620 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 CYB5R2Q6BCY4 276 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF774Q6NX45 483 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 POM121L2Q96KW2 1035 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 ERMAPQ96PL5 475 aaPredicted RBP13.92□□□□□ -0.18
CPSF6-203ENST00000456847 GPA33Q99795 319 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 MUC13Q9H3R2 512 aa13.92□□□□□ -0.18
CPSF6-203ENST00000456847 IGHV4-61A0A0C4DH41 118 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 IGHV4-31P0DP07 118 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 FPR3P25089 353 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 CENPAP49450 140 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 GZMKP49863 264 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 FXYD6P3P58550 94 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 GLO1Q04760 184 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 SCRN3Q0VDG4 424 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 UGT2A3Q6UWM9 527 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 ZER1Q7Z7L7 766 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 JAZF1Q86VZ6 243 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF786Q8N393 782 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 GNPDA2Q8TDQ7 276 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 OR52D1Q9H346 318 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 SLCO1C1Q9NYB5 712 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 POLR1DQ9Y2S0 133 aa13.91□□□□□ -0.18
CPSF6-203ENST00000456847 ZANQ9Y493 2812 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 LOC100509620A0A075B734 347 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 LYNX1G3V0Z9 82 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 DOK2O60496 412 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 CRLF1O75462 422 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 SCG5P05408 212 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 LYNX1P0DP58 116 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF250P15622 560 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 GCH1P30793 250 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 SPATA46Q5T0L3 261 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 TMEM154Q6P9G4 183 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 DNM1P34Q6PK57 102 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 SYT9Q86SS6 491 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 DHFR2Q86XF0 187 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 ABHD4Q8TB40 342 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 IFT27Q9BW83 186 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 VSX1Q9NZR4 365 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-203ENST00000456847 NDRG4Q9ULP0 352 aaKnown RBP13.9□□□□□ -0.18
CPSF6-203ENST00000456847 COA3Q9Y2R0 106 aaPredicted RBP13.9□□□□□ -0.18
CPSF6-203ENST00000456847 TNFRSF11BO00300 401 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 MT-ND5P03915 603 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 WNT5AP41221 380 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 HTR5AP47898 357 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 MOGQ16653 247 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 RFX4Q33E94 735 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF718Q3SXZ3 478 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 PTCHD4Q6ZW05 846 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 GLB1L2Q8IW92 636 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 ZNF101Q8IZC7 436 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 WACQ9BTA9 647 aa13.9□□□□□ -0.18
CPSF6-203ENST00000456847 HINT3Q9NQE9 182 aaKnown RBP13.9□□□□□ -0.18
CPSF6-203ENST00000456847 PRPF19Q9UMS4 504 aaKnown RBP13.9□□□□□ -0.18
CPSF6-203ENST00000456847 IGLV3-9A0A075B6K5 115 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 IMPA2O14732 288 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 SGCEO43556 437 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 KRT36O76013 467 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 TXNDC12O95881 172 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 RENP00797 406 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 HPXP02790 462 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 ZNF23P17027 643 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 GIFP27352 417 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 NOS3P29474 1203 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 ARHGDIAP52565 204 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 AQP6Q13520 282 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 OTPQ5XKR4 325 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 LCN8Q6JVE9 175 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 LEG1Q6P5S2 330 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 ARL9Q6T311 187 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 RFPL4BQ6ZWI9 263 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.89□□□□□ -0.19
CPSF6-203ENST00000456847 CCDC124Q96CT7 223 aaKnown RBP13.89□□□□□ -0.19
CPSF6-203ENST00000456847 SAMD8Q96LT4 415 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 LRGUKQ96M69 825 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 NUAK2Q9H093 628 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 ELOVL3Q9HB03 270 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 NAV3Q8IVL0 2385 aa13.89□□□□□ -0.19
CPSF6-203ENST00000456847 RTTNQ86VV8 2226 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 TPD52L2O43399 206 aaKnown RBP13.88□□□□□ -0.19
CPSF6-203ENST00000456847 ABHD16AO95870 558 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 CRABP1P29762 137 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 CDKN2AP42771 156 aaKnown RBP13.88□□□□□ -0.19
CPSF6-203ENST00000456847 CHN2P52757 468 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 PPP1CBP62140 327 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 TSPAN31Q12999 210 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 TRIM25Q14258 630 aaKnown RBP13.88□□□□□ -0.19
CPSF6-203ENST00000456847 PGBD2Q6P3X8 592 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 OR9Q2Q8NGE9 314 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 SLC25A40Q8TBP6 338 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 RDH5Q92781 318 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 MAGIXQ9H6Y5 334 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 PLEK2Q9NYT0 353 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 LYVE1Q9Y5Y7 322 aa13.88□□□□□ -0.19
CPSF6-203ENST00000456847 NIPBLQ6KC79 2804 aaeCLIP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms