RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 LSSP48449 732 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 CAV2P51636 162 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 BTN3A2P78410 334 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 HIST2H3PS2Q5TEC6 136 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 GLT8D1Q68CQ7 371 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 CDC73Q6P1J9 531 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 APOOLQ6UXV4 268 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 C5orf24Q7Z6I8 188 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 HIST3H2BBQ8N257 126 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 OR52B4Q8NGK2 314 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 NT5CQ8TCD5 201 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 LMX1AQ8TE12 382 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 GAL3ST3Q96A11 431 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 FOXRED1Q96CU9 486 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 MVB12AQ96EY5 273 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 HSPA12BQ96MM6 686 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 YPEL4Q96NS1 127 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 AMDHD1Q96NU7 426 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ZFYVE21Q9BQ24 234 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TMEM231Q9H6L2 316 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 FAM212BQ9NTI7 297 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 PILRAQ9UKJ1 303 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 SIT1Q9Y3P8 196 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 NPFFR2Q9Y5X5 522 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 KPTNQ9Y664 436 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 SCN2AQ99250 2005 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 CCDC88CQ9P219 2028 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TMEM131Q92545 1883 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 A0A0J9YY10 115 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TMEM272A0A1B0GTI8 110 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ANKRD20A5PA0PJZ0 165 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ZNF705EA8MWA4 302 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 F8VVB4 439 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 F8VWA3 439 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 RNASEK-C17orf49H0YIS7 233 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 GABARAPH6UMI1 98 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 J3KTA2 159 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 HAX1O00165 279 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 PGRMC2O15173 223 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 P2RX6O15547 441 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 HSPA12AO43301 675 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 RNF13O43567 381 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TLX2O43763 284 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TSPAN2O60636 221 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ERAL1O75616 437 aaKnown RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 AIFM1O95831 613 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 IGFBP1P08833 259 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ZNF888P0CJ79 500 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 OR12D1P0DN82 309 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 CELP19835 753 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 FGF7P21781 194 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TACR3P29371 465 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 AQP1P29972 269 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 PPP2R1BP30154 601 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 CXCL12P48061 93 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 SCARB2Q14108 478 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 GINS1Q14691 196 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 MLC1Q15049 377 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ISXQ2M1V0 245 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ARMC6Q6NXE6 501 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ACOT7LQ6ZUV0 252 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 OOSP2Q86WS3 158 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 GKN2Q86XP6 184 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 UBALD2Q8IYN6 164 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 HSD17B11Q8NBQ5 300 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ZNF248Q8NDW4 579 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 BAHD1Q8TBE0 780 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 RNF141Q8WVD5 230 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 NUDCD2Q8WVJ2 157 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 RSC1A1Q92681 617 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 NEURL3Q96EH8 262 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 GALNT14Q96FL9 552 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 ZNF649Q9BS31 505 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TMEM38AQ9H6F2 299 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 RPS10P5Q9NQ39 176 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 MEPEQ9NQ76 525 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 SIRT3Q9NTG7 399 aaPredicted RBP6.92□□□□□ -1.3
HDAC9-218ENST00000456174 DOK5Q9P104 306 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 TMED3Q9Y3Q3 217 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 FLVCR1Q9Y5Y0 555 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 POMT1Q9Y6A1 747 aa6.92□□□□□ -1.3
HDAC9-218ENST00000456174 USP34Q70CQ2 3546 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 YLPM1P49750 1951 aaKnown RBP6.91□□□□□ -1.3
HDAC9-218ENST00000456174 SPAG17Q6Q759 2223 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 A0A1W2PPQ1 181 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 ZNF724A8MTY0 619 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 M0R143 59 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 DVL2O14641 736 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 DIRAS3O95661 229 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 BCKDHBP21953 392 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 ADH6P28332 368 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 NTSP30990 170 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 THBS4P35443 961 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 ATP6V1E1P36543 226 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 GSK3AP49840 483 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 PPP1CAP62136 330 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 EIF5AP63241 154 aaKnown RBP6.91□□□□□ -1.3
HDAC9-218ENST00000456174 NAAAQ02083 359 aa6.91□□□□□ -1.3
HDAC9-218ENST00000456174 OC90Q02509 493 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms