RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 GGT3PA6NGU5 568 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 H7C417 338 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 MEN1O00255 615 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 EFNA2O43921 213 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 FGF5P12034 268 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 CXCL3P19876 107 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 POU3F1Q03052 451 aaPredicted RBP13.48□□□□□ -0.25
LDLR-202ENST00000455727 C2orf76Q3KRA6 126 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 METTL11BQ5VVY1 283 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 THOC7Q6I9Y2 204 aaKnown RBP13.48□□□□□ -0.25
LDLR-202ENST00000455727 NHLRC1Q6VVB1 395 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 LUZP2Q86TE4 346 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
LDLR-202ENST00000455727 ADPRHL1Q8NDY3 354 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 OR51D1Q8NGF3 324 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 PPP1R14AQ96A00 147 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 FAM3DQ96BQ1 224 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 CMKLR1Q99788 373 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 SERINC1Q9NRX5 453 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 HHLA2Q9UM44 414 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 GTF2A1LQ9UNN4 478 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 MEGF11A6BM72 1044 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 RBBP9O75884 186 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 WNT11O96014 354 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 POU3F4P49335 361 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 MECP2P51608 486 aaKnown RBP13.48□□□□□ -0.25
LDLR-202ENST00000455727 FMODQ06828 376 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 PLA2G7Q13093 441 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 IL11RAQ14626 422 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 FAM69BQ5VUD6 431 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 GLT8D1Q68CQ7 371 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 LCN10Q6JVE6 187 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 SEZ6L2Q6UXD5 910 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 ZNF782Q6ZMW2 699 aaPredicted RBP13.48□□□□□ -0.25
LDLR-202ENST00000455727 ZNF704Q6ZNC4 412 aaPredicted RBP13.48□□□□□ -0.25
LDLR-202ENST00000455727 DCXRQ7Z4W1 244 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 MDGA2Q7Z553 956 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 WDR5BQ86VZ2 330 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 RELTQ969Z4 430 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 C5orf34Q96MH7 638 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 WDR54Q9H977 334 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 G6PC2Q9NQR9 355 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 NPTNQ9Y639 398 aa13.48□□□□□ -0.25
LDLR-202ENST00000455727 A0A1W2PQ72 361 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 H3BSH0 61 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 AKR7A2O43488 359 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 OR2J2O76002 312 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 DKK1O94907 266 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 ACHEP22303 614 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 GPR85P60893 370 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 ZNF767PQ75MW2 155 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 OR10G3Q8NGC4 313 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 OR1J4Q8NGS1 313 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 POC1BQ8TC44 478 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 SLC25A28Q96A46 364 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 METTL7AQ9H8H3 244 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 NOX3Q9HBY0 568 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 APMAPQ9HDC9 416 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 PRMT8Q9NR22 394 aaPredicted RBP13.47□□□□□ -0.25
LDLR-202ENST00000455727 MED29Q9NX70 200 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 NKIRAS2Q9NYR9 191 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 NXT1Q9UKK6 140 aaKnown RBP13.47□□□□□ -0.25
LDLR-202ENST00000455727 EMC9Q9Y3B6 208 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 HRH3Q9Y5N1 445 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 CIB4A0PJX0 185 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 SSNA1O43805 119 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 HPXP02790 462 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 PTHLHP12272 177 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 DCTDP32321 178 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 FAUP35544 74 aaKnown RBP13.47□□□□□ -0.25
LDLR-202ENST00000455727 SSBP1Q04837 148 aaKnown RBP13.47□□□□□ -0.25
LDLR-202ENST00000455727 MYBPHQ13203 477 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 WDFY1Q8IWB7 410 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 BEST4Q8NFU0 473 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 RNF133Q8WVZ7 376 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 RBP7Q96R05 134 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 MRPL13Q9BYD1 178 aaKnown RBP13.47□□□□□ -0.25
LDLR-202ENST00000455727 OCIAD1Q9NX40 245 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 B3GAT1Q9P2W7 334 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 OR52A1Q9UKL2 312 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 MYO15AQ9UKN7 3530 aa13.47□□□□□ -0.25
LDLR-202ENST00000455727 H3BML4 177 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 ICMTO60725 284 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 NDUFB6O95139 128 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 CSF1P09603 554 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 FKBP2P26885 142 aaKnown RBP13.46□□□□□ -0.25
LDLR-202ENST00000455727 VEGFCP49767 419 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 MMP16P51512 607 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 EFNB2P52799 333 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 TMEM244Q5VVB8 128 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 OR2M3Q8NG83 312 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 ELP5Q8TE02 316 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 ZNF431Q8TF32 576 aaPredicted RBP13.46□□□□□ -0.25
LDLR-202ENST00000455727 EDAQ92838 391 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 SPACA9Q96E40 222 aaPredicted RBP13.46□□□□□ -0.25
LDLR-202ENST00000455727 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 CDX2Q99626 313 aaPredicted RBP13.46□□□□□ -0.25
LDLR-202ENST00000455727 DEFB126Q9BYW3 111 aa13.46□□□□□ -0.25
LDLR-202ENST00000455727 OR10A4Q9H209 315 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms