RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 TRAPPC2P0DI81 140 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 TRAPPC2BP0DI82 140 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ZNF35P13682 527 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ALOX5APP20292 161 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 AQP2P41181 271 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 KIR3DL2P43630 455 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 CAPZA2P47755 286 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.33□□□□□ -1.72
RIF1-207ENST00000454583 ETFDHQ16134 617 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ACKR1Q16570 336 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 SLC35F1Q5T1Q4 408 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 TMEM42Q69YG0 159 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 OR5M10Q6IEU7 315 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 NUFIP2Q7Z417 695 aaKnown RBP4.33□□□□□ -1.72
RIF1-207ENST00000454583 GALNTL5Q7Z4T8 443 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 CPOQ8IVL8 374 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 POMGNT2Q8NAT1 580 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 FAM98AQ8NCA5 519 aaKnown RBP4.33□□□□□ -1.72
RIF1-207ENST00000454583 Q8NFD4 153 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 OR2V1Q8NHB1 315 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 PHOSPHO1Q8TCT1 267 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 EXTL1Q92935 676 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 RASD2Q96D21 266 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 FBXO17Q96EF6 278 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ST6GAL2Q96JF0 529 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 CNTNAP3BQ96NU0 1288 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 TTYH2Q9BSA4 534 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ALG12Q9BV10 488 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 CNTNAP3Q9BZ76 1288 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 MED20Q9H944 212 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 HPF1Q9NWY4 346 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 TVP23BQ9NYZ1 205 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 UPB1Q9UBR1 384 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ATPIF1Q9UII2 106 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 OTOGQ6ZRI0 2925 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 COL12A1Q99715 3063 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 TP53I11O14683 189 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 KLK10O43240 276 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 RAF1P04049 648 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 EDN3P14138 238 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 CFL1P23528 166 aaKnown RBP4.33□□□□□ -1.72
RIF1-207ENST00000454583 ZNF474Q6S9Z5 364 aaPredicted RBP4.33□□□□□ -1.72
RIF1-207ENST00000454583 OR6F1Q8NGZ6 308 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 BCL2L2Q92843 193 aaPredicted RBP4.33□□□□□ -1.72
RIF1-207ENST00000454583 WACQ9BTA9 647 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ASPNQ9BXN1 380 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ZNF71Q9NQZ8 489 aaPredicted RBP4.33□□□□□ -1.72
RIF1-207ENST00000454583 PGPEP1Q9NXJ5 209 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 BABAM2Q9NXR7 383 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 CRIM1Q9NZV1 1036 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 CR1P17927 2039 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 FAM186AA6NE01 2351 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 TNFRSF13BO14836 293 aaPredicted RBP4.33□□□□□ -1.72
RIF1-207ENST00000454583 ZNHIT1O43257 154 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 LANCL1O43813 399 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 REM1O75628 298 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 NDUFB2O95178 105 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 MELTFP08582 738 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 OR2T7P0C7T2 308 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 PAX1P15863 534 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 FSTP19883 344 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 HSF1Q00613 529 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 POU4F2Q12837 409 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 FAM205BPQ63HN1 556 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 OR2T27Q8NH04 317 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 RNF133Q8WVZ7 376 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 GATAD2BQ8WXI9 593 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 ZNF416Q9BWM5 594 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 GALNT8Q9NY28 637 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 FRRS1LQ9P0K9 344 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 PPP4R1LQ9P1A2 415 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 MED31Q9Y3C7 131 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 AUP1Q9Y679 476 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 FKBP7Q9Y680 259 aa4.33□□□□□ -1.72
RIF1-207ENST00000454583 GTF3C1Q12789 2109 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 PTPRQQ9UMZ3 2332 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 A0A0G2JNJ9 132 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 C5orf58C9J3I9 102 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 FCN3O75636 299 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 GLCEO94923 617 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 PNPP00491 289 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 HMGN1P05114 100 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 IFNGR2P38484 337 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 SELENOPP49908 381 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 SCAND1P57086 179 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 HSF2Q03933 536 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 PUDPQ08623 228 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 LIPKQ5VXJ0 399 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 ARHGAP11AQ6P4F7 1023 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 XKRXQ6PP77 449 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 CFAP77Q6ZQR2 320 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 ZNF843Q8N446 348 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 CLEC1AQ8NC01 280 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 KBTBD8Q8NFY9 601 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 ZCCHC14Q8WYQ9 949 aaKnown RBP4.32□□□□□ -1.72
RIF1-207ENST00000454583 CPNE4Q96A23 557 aaPredicted RBP4.32□□□□□ -1.72
RIF1-207ENST00000454583 DDIT4LQ96D03 193 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 TM9SF2Q99805 663 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 SDHAF3Q9NRP4 125 aa4.32□□□□□ -1.72
RIF1-207ENST00000454583 Q9UFV3 132 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms