RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 TBC1D28Q2M2D7 210 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 SLC36A3Q495N2 470 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 KRT80Q6KB66 452 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 FAHD1Q6P587 224 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 YTHDF3Q7Z739 585 aaKnown RBP12.22□□□□□ -0.45
HDAC4-205ENST00000454542 OR6V1Q8N148 313 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 SLC26A10Q8NG04 563 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 OR2T33Q8NG76 320 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 DNAJC9Q8WXX5 260 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 C11orf40Q8WZ69 217 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 POM121L2Q96KW2 1035 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 RBM4Q9BWF3 364 aaKnown RBP12.22□□□□□ -0.45
HDAC4-205ENST00000454542 TSSK6Q9BXA6 273 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 NMNAT2Q9BZQ4 307 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 GABARAPL1Q9H0R8 117 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 KCNN2Q9H2S1 579 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 RNF121Q9H920 327 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 CCNB1IP1Q9NPC3 277 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.22□□□□□ -0.45
HDAC4-205ENST00000454542 ATPIF1Q9UII2 106 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 B9D1Q9UPM9 204 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 IQCMA0A1B0GVH7 501 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 C12orf71A8MTZ7 269 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 CIB2O75838 187 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 OR4A8P0C604 315 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 COX5BP10606 129 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 FCGR1AP12314 374 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 ANXA8P13928 327 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 APEX1P27695 318 aaKnown RBP12.21□□□□□ -0.45
HDAC4-205ENST00000454542 NOS3P29474 1203 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 SERPINF1P36955 418 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 ACTR3P61158 418 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 RPS23P62266 143 aaKnown RBP12.21□□□□□ -0.45
HDAC4-205ENST00000454542 HIST1H3AP68431 136 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 HSF2Q03933 536 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 PLP2Q04941 152 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 SCRN3Q0VDG4 424 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 HIST2H3PS2Q5TEC6 136 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 HIST2H3AQ71DI3 136 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 SLC37A3Q8NCC5 494 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 OR52E2Q8NGJ4 325 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 OR1J2Q8NGS2 313 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 AKR7LQ8NHP1 331 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 MRPL24Q96A35 216 aaKnown RBP12.21□□□□□ -0.45
HDAC4-205ENST00000454542 TRMT61AQ96FX7 289 aaKnown RBP12.21□□□□□ -0.45
HDAC4-205ENST00000454542 FOXN4Q96NZ1 517 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 FN3KQ9H479 309 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 RPRD1BQ9NQG5 326 aaKnown RBP12.21□□□□□ -0.45
HDAC4-205ENST00000454542 CMC2Q9NRP2 79 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 KLHL21Q9UJP4 597 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 TIMM10BQ9Y5J6 103 aa12.21□□□□□ -0.45
HDAC4-205ENST00000454542 FLNAP21333 2647 aaKnown RBP12.2□□□□□ -0.46
HDAC4-205ENST00000454542 LOC100509620A0A075B734 347 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 TMEM129A0AVI4 362 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 OR6C6A6NF89 314 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 NDUFS7O75251 213 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 MPZL1O95297 269 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 GPANK1O95872 356 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 CCL2P13500 99 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 OSMP13725 252 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 STOMP27105 288 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 GRK5P34947 590 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 APLNRP35414 380 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 WNT5AP41221 380 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 GUCA1AP43080 201 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-205ENST00000454542 EVX1P49640 407 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 PPOXP50336 477 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 SLC25A1P53007 311 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 GALK2Q01415 458 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 GLO1Q04760 184 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 CRMP1Q14194 572 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 SLC35F1Q5T1Q4 408 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 ZNF774Q6NX45 483 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 VHLLQ6RSH7 139 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 VASH1Q7L8A9 365 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-205ENST00000454542 PARP8Q8N3A8 854 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 OR5K1Q8NHB7 308 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 TEX47Q8TBZ9 253 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 DOK1Q99704 481 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 CDH20Q9HBT6 801 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 BARX1Q9HBU1 254 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-205ENST00000454542 SLC25A19Q9HC21 320 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 ASH2LQ9UBL3 628 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 GDF2Q9UK05 429 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-205ENST00000454542 FBXO9Q9UK97 447 aaPredicted RBP12.2□□□□□ -0.46
HDAC4-205ENST00000454542 SPEF1Q9Y4P9 236 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 AP4S1Q9Y587 144 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 LHFPL6Q9Y693 200 aa12.2□□□□□ -0.46
HDAC4-205ENST00000454542 IGLV3-9A0A075B6K5 115 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 SYNGR3O43761 229 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 DOK2O60496 412 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 TFP02787 698 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 FASP25445 335 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 SNRPD2P62316 118 aaKnown RBP12.19□□□□□ -0.46
HDAC4-205ENST00000454542 DBPQ10586 325 aaPredicted RBP12.19□□□□□ -0.46
HDAC4-205ENST00000454542 ZNF101Q8IZC7 436 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 IQCF1Q8N6M8 205 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 CYB561A3Q8NBI2 242 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 Q96MF0 132 aa12.19□□□□□ -0.46
HDAC4-205ENST00000454542 MRPL37Q9BZE1 423 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms