RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 OR2T4Q8NH00 348 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 SMAP2Q8WU79 429 aaPredicted RBP24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 DHRS9Q9BPW9 319 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 C1orf198Q9H425 327 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 RTTNQ86VV8 2226 aa24.24■■□□□ 1.47
SMARCC1-203ENST00000454240 FAM171A2A8MVW0 826 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 HMGN1P05114 100 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 ZNF3P17036 446 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 CENPAP49450 140 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 TMEM236Q5W0B7 351 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 OTPQ5XKR4 325 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 CPEB3Q8NE35 698 aaKnown RBP24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 SLC26A10Q8NG04 563 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 ZNRF4Q8WWF5 429 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 MBD6Q96DN6 1003 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 OR2H1Q9GZK4 316 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 WNT5BQ9H1J7 359 aa24.23■■□□□ 1.47
SMARCC1-203ENST00000454240 IQCMA0A1B0GVH7 501 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 SURF4O15260 269 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 TFP02787 698 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 AQP6Q13520 282 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 PTGES3Q15185 160 aaKnown RBP24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 PQLC1Q8N2U9 271 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 SLC30A7Q8NEW0 376 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 NUP37Q8NFH4 326 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 OR9Q1Q8NGQ5 310 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 AKR7LQ8NHP1 331 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 PIGTQ969N2 578 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 CIB1Q99828 191 aa24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 RBM4BQ9BQ04 359 aaKnown RBP24.22■■□□□ 1.47
SMARCC1-203ENST00000454240 IGFBP5P24593 272 aa24.21■■□□□ 1.47
SMARCC1-203ENST00000454240 PYCR1P32322 319 aa24.21■■□□□ 1.47
SMARCC1-203ENST00000454240 MEP1BQ16820 701 aa24.21■■□□□ 1.47
SMARCC1-203ENST00000454240 ZNF544Q6NX49 715 aa24.21■■□□□ 1.47
SMARCC1-203ENST00000454240 STMN2Q93045 179 aa24.21■■□□□ 1.47
SMARCC1-203ENST00000454240 CCL19Q99731 98 aa24.21■■□□□ 1.47
SMARCC1-203ENST00000454240 SOD3P08294 240 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 SPI1P17947 270 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 APEX1P27695 318 aaKnown RBP24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 TTKP33981 857 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 NKX6-1P78426 367 aaPredicted RBP24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 TEKQ02763 1124 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 SCRN3Q0VDG4 424 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 ALDH16A1Q8IZ83 802 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 PROKR2Q8NFJ6 384 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 OR1J2Q8NGS2 313 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 PTP4A1Q93096 173 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 HCAR1Q9BXC0 346 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 TEX12Q9BXU0 123 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 CA10Q9NS85 328 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 FAIMQ9NVQ4 179 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 ASH2LQ9UBL3 628 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 ENOPH1Q9UHY7 261 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 LAMP3Q9UQV4 416 aa24.2■■□□□ 1.46
SMARCC1-203ENST00000454240 FAM183AA6NL82 134 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 SNAP29O95721 258 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 GYPBP06028 91 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 CLUP10909 449 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 NR4A1P22736 598 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 STOMP27105 288 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 EPHA2P29317 976 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 APOBEC3AP31941 199 aaPredicted RBP24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 FABP6P51161 128 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 TBC1D28Q2M2D7 210 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 ZNF774Q6NX45 483 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 DTX2Q86UW9 622 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 PAQR4Q8N4S7 273 aaPredicted RBP24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 OR51L1Q8NGJ5 315 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 POM121L2Q96KW2 1035 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 GRIP2Q9C0E4 1043 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 MRPL22Q9NWU5 206 aaKnown RBP24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 USE1Q9NZ43 259 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 LHFPL6Q9Y693 200 aa24.19■■□□□ 1.46
SMARCC1-203ENST00000454240 AKAP9Q99996 3911 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 ZAR1LA6NP61 321 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 TMCC2O75069 709 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 CD8AP01732 235 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 HLA-DQA2P01906 255 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 ALPLP05186 524 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 CCL2P13500 99 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 APLNRP35414 380 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 HIST1H3AP68431 136 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 DAG1Q14118 895 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 DEFB113Q30KQ7 82 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 HIST2H3PS2Q5TEC6 136 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 HIST2H3AQ71DI3 136 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 MED20Q9H944 212 aa24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 BEX4Q9NWD9 120 aaPredicted RBP24.18■■□□□ 1.46
SMARCC1-203ENST00000454240 MAST4O15021 2626 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 LOC100509620A0A075B734 347 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 ERICH4A6NGS2 130 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 PAICSP22234 425 aaKnown RBP24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 LINC01590Q5TEZ4 76 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 AGAP6Q5VW22 663 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 SLX4IPQ5VYV7 408 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 KRT80Q6KB66 452 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 ZSCAN2Q7Z7L9 614 aaPredicted RBP24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 FBXL14Q8N1E6 418 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 MUC15Q8N387 334 aa24.17■■□□□ 1.46
SMARCC1-203ENST00000454240 OR10H5Q8NGA6 315 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms