RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	NR2C1	P13056	603 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	SRD5A1	P18405	259 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	DRD4	P21917	467 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	STOM	P27105	288 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	MSX2	P35548	267 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	GUCA1A	P43080	201 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	RAD52	P43351	418 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	GPR6	P46095	362 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	EVX1	P49640	407 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	GDI2	P50395	445 aa	Known RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF133	P52736	654 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	UCP2	P55851	309 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	RAP1B	P61224	184 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	RAP1A	P62834	184 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	CCL8	P80075	99 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	RIN1	Q13671	783 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	TAF11	Q15544	211 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	TST	Q16762	297 aa	Known RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	CR1L	Q2VPA4	569 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	AVPI1	Q5T686	147 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	GLYAT	Q6IB77	296 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF774	Q6NX45	483 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	TMEM154	Q6P9G4	183 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	SLC25A47	Q6Q0C1	308 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	HACD2	Q6Y1H2	254 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	RFPL4B	Q6ZWI9	263 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	MBOAT2	Q6ZWT7	520 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF771	Q7L3S4	317 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF101	Q8IZC7	436 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	LRRC75A	Q8NAA5	344 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	OR52J3	Q8NH60	311 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ABHD4	Q8TB40	342 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF519	Q8TB69	540 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	RASD2	Q96D21	266 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859		Q96M85	177 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF570	Q96NI8	536 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	BCL2L14	Q9BZR8	327 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	OR2H1	Q9GZK4	316 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	NMNAT1	Q9HAN9	279 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	SMURF2	Q9HAU4	748 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	LPAR2	Q9HBW0	351 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	SPAG4	Q9NPE6	437 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF275	Q9NSD4	429 aa	Predicted RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	ABCD2	Q9UBJ2	740 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	GRHPR	Q9UBQ7	328 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	LPAR3	Q9UBY5	353 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	RPS6KA6	Q9UK32	745 aa		7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	FAM32A	Q9Y421	112 aa	Known RBP	7.42	□□□□□ -1.22
RFX3-209	ENST00000451859	LOC100509620	A0A075B734	347 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	TRBV4-1	A0A0J9YWV2	114 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	GMNC	A6NCL1	334 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	SOCS2	O14508	198 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	NDUFAB1	O14561	156 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	XKRY	O14609	159 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	IMPA2	O14732	288 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	WNT9B	O14905	357 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	SNAP29	O95721	258 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	SCG5	P05408	212 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	CST2	P09228	141 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	TACSTD2	P09758	323 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF26	P17031	533 aa	Predicted RBP	7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	HNF1A	P20823	631 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	MSR1	P21757	451 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	ACHE	P22303	614 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	GCH1	P30793	250 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	MPV17	P39210	176 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	WNT5A	P41221	380 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	CENPA	P49450	140 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	GNGT1	P63211	74 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	MXRA7	P84157	204 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	PSG4	Q00888	419 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	MVK	Q03426	396 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	FHL1	Q13642	323 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	NRN1L	Q496H8	165 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	ZBED5	Q49AG3	693 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	MEST	Q5EB52	335 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	THEM4	Q5T1C6	240 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	FAM205BP	Q63HN1	556 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	UGT2A3	Q6UWM9	527 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	RINL	Q6ZS11	566 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	TSEN54	Q7Z6J9	526 aa	Known RBP	7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	RNF113B	Q8IZP6	322 aa	Known RBP	7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	LINC01356	Q8N9X3	169 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	CLDND2	Q8NHS1	167 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	SLC25A40	Q8TBP6	338 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	SLC7A13	Q8TCU3	470 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	IPCEF1	Q8WWN9	437 aa	Predicted RBP	7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	RDH5	Q92781	318 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	RSRC1	Q96IZ7	334 aa	Known RBP	7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	ZNF416	Q9BWM5	594 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	OR2J1	Q9GZK6	312 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	NDEL1	Q9GZM8	345 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	WNT5B	Q9H1J7	359 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	MYLK2	Q9H1R3	596 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	HINT3	Q9NQE9	182 aa	Known RBP	7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	TMEM160	Q9NX00	188 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	TREM2	Q9NZC2	230 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	NDUFAF4	Q9P032	175 aa		7.41	□□□□□ -1.22
RFX3-209	ENST00000451859	EIF3K	Q9UBQ5	218 aa	Known RBP	7.41	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms