RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 C5orf24Q7Z6I8 188 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 SLC25A42Q86VD7 318 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 GKN2Q86XP6 184 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 LRRC18Q8N456 261 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 ZNF740Q8NDX6 193 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 OR13C8Q8NGS7 320 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 CD300LFQ8TDQ1 290 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 ZG16BQ96DA0 208 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 WDR92Q96MX6 357 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 AMDHD1Q96NU7 426 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 TAF9BQ9HBM6 251 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 AHSPQ9NZD4 102 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 MRPS33Q9Y291 106 aaKnown RBP7.81□□□□□ -1.16
LSM5-208ENST00000450169 STARD10Q9Y365 291 aa7.81□□□□□ -1.16
LSM5-208ENST00000450169 A0A087WUJ7 227 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CCDC187A0A096LP49 1063 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CCL15-CCL14A0A0B4J2E2 113 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 TMEM235A6NFC5 223 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 K7ERQ8 282 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 DLEU1O43261 78 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 SRPX2O60687 465 aaPredicted RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 ALOX12BO75342 701 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 TSPAN15O95858 294 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 SPARCP09486 303 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 RAB6AP20340 208 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 MAKP20794 623 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CCL15Q16663 113 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 TMPPEQ6ZT21 453 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 LANCL3Q6ZV70 420 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CHST9Q7L1S5 443 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 SLC35F2Q8IXU6 374 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 OR2L13Q8N349 312 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 ZNF664Q8N3J9 261 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 TTC9BQ8N6N2 239 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 ACOT4Q8N9L9 421 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 LYPD6BQ8NI32 183 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 M1APQ8TC57 530 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 GPR148Q8TDV2 347 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CASTOR1Q8WTX7 329 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 ZNF480Q8WV37 535 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 ZNF775Q96BV0 537 aaPredicted RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 TMEM208Q9BTX3 173 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 SNHG12Q9BXW3 62 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 NMES1Q9C002 83 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CST11Q9H112 138 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 C20orf141Q9NUB4 165 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 MARCH5Q9NX47 278 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 WSB2Q9NYS7 404 aaPredicted RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 OR14J1Q9UGF5 321 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 VSIG4Q9Y279 399 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 FARSAQ9Y285 508 aaKnown RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 OR2AG2A6NM03 316 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 FIGNL2A6NMB9 653 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 H0YIZ8 118 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 MAS1P04201 325 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 HMGN2P05204 90 aaKnown RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 QDPRP09417 244 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 LINC00614P0C842 121 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 ZNF735P0CB33 412 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CSRP1P21291 193 aaKnown RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 SERPINF1P36955 418 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 DHPSP49366 369 aaPredicted RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 NANOS3P60323 173 aaKnown RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 CYCSP99999 105 aaKnown RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 SLC10A1Q14973 349 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 ELOCQ15369 112 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 TOMM34Q15785 309 aaPredicted RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 DUSP5Q16690 384 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 Q499Y3 187 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 PRAMEF8Q5VWM4 474 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 PRAMEF7Q5VXH5 474 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 GDPD4Q6W3E5 623 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 OR6J1Q8NGC5 347 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 OR51D1Q8NGF3 324 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 OR13C2Q8NGS9 318 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 PFN4Q8NHR9 129 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 RPS4Y2Q8TD47 263 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 THAP3Q8WTV1 239 aaPredicted RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 FGF13Q92913 245 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 TMEM159Q96B96 161 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 MUCL1Q96DR8 90 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 AQP10Q96PS8 301 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 LGR4Q9BXB1 951 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 EIF5A2Q9GZV4 153 aaKnown RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 EPHX3Q9H6B9 360 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 CERS4Q9HA82 394 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 YBX2Q9Y2T7 364 aaKnown RBP7.8□□□□□ -1.16
LSM5-208ENST00000450169 AMDHD2Q9Y303 409 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 KCNE3Q9Y6H6 103 aa7.8□□□□□ -1.16
LSM5-208ENST00000450169 A0A096LPE4 126 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 A0A1W2PPC1 479 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 A0A1W2PPZ6 126 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 ZNF736B4DX44 427 aaPredicted RBP7.79□□□□□ -1.16
LSM5-208ENST00000450169 C9J4A7 227 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 CYB5AP00167 134 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 NPSP0C0P6 89 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 F3P13726 295 aa7.79□□□□□ -1.16
LSM5-208ENST00000450169 SNCAP37840 140 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms