RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 DIRAS1O95057 198 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 IL2RGP31785 369 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 ARHGDIAP52565 204 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 TMEM33P57088 247 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 SMIM11AP58511 58 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 CCL8P80075 99 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 TEKQ02763 1124 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 GLO1Q04760 184 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 KRR1Q13601 381 aaKnown RBP13.06□□□□□ -0.32
CHD3-205ENST00000449744 CCNIQ14094 377 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 MESTQ5EB52 335 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 SAMD4BQ5PRF9 694 aaKnown RBP13.06□□□□□ -0.32
CHD3-205ENST00000449744 SPATA46Q5T0L3 261 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 GPR139Q6DWJ6 353 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 ZNF774Q6NX45 483 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 ARL9Q6T311 187 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 IL17RELQ6ZVW7 336 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 SYT9Q86SS6 491 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 C1orf174Q8IYL3 243 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 ZNF101Q8IZC7 436 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 PGAM4Q8N0Y7 254 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 FAM86B1Q8N7N1 296 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 ABHD4Q8TB40 342 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 YIPF5Q969M3 257 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 MCUR1Q96AQ8 359 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 PYURFQ96I23 114 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 RSRC1Q96IZ7 334 aaKnown RBP13.06□□□□□ -0.32
CHD3-205ENST00000449744 C7orf34Q96L11 122 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 LRRC37BQ96QE4 947 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 WACQ9BTA9 647 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 RERGLQ9H628 205 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 ELOVL3Q9HB03 270 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 ZNF275Q9NSD4 429 aaPredicted RBP13.06□□□□□ -0.32
CHD3-205ENST00000449744 DECR2Q9NUI1 292 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 TAGLN3Q9UI15 199 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 NDRG4Q9ULP0 352 aaKnown RBP13.06□□□□□ -0.32
CHD3-205ENST00000449744 ARL2BPQ9Y2Y0 163 aa13.06□□□□□ -0.32
CHD3-205ENST00000449744 FBN3Q75N90 2809 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 TRBV4-1A0A0J9YWV2 114 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 PRSS37A4D1T9 235 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 UNC119BA6NIH7 251 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 CDC14BO60729 498 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 PTP4A3O75365 173 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 DCTN3O75935 186 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 IGHV3-13P01766 116 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 SDHAP31040 664 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 WNT5AP41221 380 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 OMPP47874 163 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 LIMS1P48059 325 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 RPS6KA3P51812 740 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 GYS2P54840 703 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 CDH15P55291 814 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 MXRA7P84157 204 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 SCRN3Q0VDG4 424 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 ENDOGQ14249 297 aaKnown RBP13.05□□□□□ -0.32
CHD3-205ENST00000449744 CR1LQ2VPA4 569 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 FAM122BQ7Z309 247 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 SLC25A40Q8TBP6 338 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 RASD2Q96D21 266 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 NSMCE2Q96MF7 247 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 EMC7Q9NPA0 242 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 NRIP3Q9NQ35 241 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 NDE1Q9NXR1 346 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 NKIRAS2Q9NYR9 191 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 MALRD1Q5VYJ5 2156 aa13.05□□□□□ -0.32
CHD3-205ENST00000449744 PLSCR5A0PG75 271 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 SLC16A7O60669 478 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 KHDRBS3O75525 346 aaKnown RBP13.04□□□□□ -0.32
CHD3-205ENST00000449744 GADD45GO95257 159 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 HSD17B1P14061 328 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 ZNF26P17031 533 aaPredicted RBP13.04□□□□□ -0.32
CHD3-205ENST00000449744 ZNF81P51508 661 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 PPP1CBP62140 327 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 SPIBQ01892 262 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 SEC23BQ15437 767 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 TSTQ16762 297 aaKnown RBP13.04□□□□□ -0.32
CHD3-205ENST00000449744 C16orf89Q6UX73 402 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 CLDND2Q8NHS1 167 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 TMEM158Q8WZ71 300 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 MARS2Q96GW9 593 aaKnown RBP13.04□□□□□ -0.32
CHD3-205ENST00000449744 C4orf45Q96LM5 186 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 GPX7Q96SL4 187 aaPredicted RBP13.04□□□□□ -0.32
CHD3-205ENST00000449744 CDRT15Q96T59 188 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 OR2J1Q9GZK6 312 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 SYT4Q9H2B2 425 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 IL20RAQ9UHF4 553 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 IER3IP1Q9Y5U9 82 aa13.04□□□□□ -0.32
CHD3-205ENST00000449744 B4DSR2 109 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 SOCS2O14508 198 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 SPRY3O43610 288 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 DOK2O60496 412 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 RP2O75695 350 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 ABHD16AO95870 558 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 SCG5P05408 212 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 COX5BP10606 129 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 CTLA4P16410 223 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 PCMT1P22061 227 aa13.03□□□□□ -0.32
CHD3-205ENST00000449744 MSX2P35548 267 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms