RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 VSTM5A8MXK1 200 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 FKBP6O75344 327 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 KHDRBS3O75525 346 aaKnown RBP12.58□□□□□ -0.4
USP39-206ENST00000448971 SOX14O95416 240 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 TXNDC12O95881 172 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 GASTP01350 101 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 OR4A8P0C604 315 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 GSTM3P21266 225 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 APLNRP35414 380 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 THBS4P35443 961 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 SERPINF1P36955 418 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 CENPAP49450 140 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 RPS23P62266 143 aaKnown RBP12.58□□□□□ -0.4
USP39-206ENST00000448971 HGFACQ04756 655 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 ADIPOQQ15848 244 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 ETFDHQ16134 617 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 PABPC1L2AQ5JQF8 200 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 FAM27BQ5VT28 67 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 C1orf146Q5VVC0 180 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 ZNF770Q6IQ21 691 aaPredicted RBP12.58□□□□□ -0.4
USP39-206ENST00000448971 CCDC121Q6ZUS5 278 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 FOXL2NBQ6ZUU3 175 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 HIPK1Q86Z02 1210 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 SDR9C7Q8NEX9 313 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 OR4K13Q8NH42 304 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 OR51B6Q9H340 312 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 MMADHCQ9H3L0 296 aaPredicted RBP12.58□□□□□ -0.4
USP39-206ENST00000448971 BARX1Q9HBU1 254 aaPredicted RBP12.58□□□□□ -0.4
USP39-206ENST00000448971 EMC7Q9NPA0 242 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 POLE4Q9NR33 117 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 VSX1Q9NZR4 365 aaPredicted RBP12.58□□□□□ -0.4
USP39-206ENST00000448971 PLCE1Q9P212 2302 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 GDF2Q9UK05 429 aaPredicted RBP12.58□□□□□ -0.4
USP39-206ENST00000448971 PMF1-BGLAPU3KQ54 211 aa12.58□□□□□ -0.4
USP39-206ENST00000448971 RNF212BA8MTL3 300 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 C12orf71A8MTZ7 269 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 IMPA2O14732 288 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 ARPC3O15145 178 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 GPRIN2O60269 458 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 CIB2O75838 187 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 F12P00748 615 aaPredicted RBP12.57□□□□□ -0.4
USP39-206ENST00000448971 IGHV4-39P01824 125 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 CST2P09228 141 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 MMP7P09237 267 aaPredicted RBP12.57□□□□□ -0.4
USP39-206ENST00000448971 CCL2P13500 99 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 HIST1H1CP16403 213 aaKnown RBP12.57□□□□□ -0.4
USP39-206ENST00000448971 CCNOP22674 350 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 NR4A1P22736 598 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 CRABP1P29762 137 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 NUDT6P53370 316 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 PCBD1P61457 104 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 DNM1P46Q6ZS02 220 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 RASSF6Q6ZTQ3 369 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 ICA1LQ8NDH6 482 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 OR1J2Q8NGS2 313 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 AKR7LQ8NHP1 331 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 GIPC3Q8TF64 312 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 NMNAT3Q96T66 252 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 ZNF416Q9BWM5 594 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 PLA2G12AQ9BZM1 189 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 NUAK2Q9H093 628 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 PLK3Q9H4B4 646 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 DYNLRB1Q9NP97 96 aa12.57□□□□□ -0.4
USP39-206ENST00000448971 RPRD1BQ9NQG5 326 aaKnown RBP12.57□□□□□ -0.4
USP39-206ENST00000448971 COA3Q9Y2R0 106 aaPredicted RBP12.57□□□□□ -0.4
USP39-206ENST00000448971 YLPM1P49750 1951 aaKnown RBP12.57□□□□□ -0.4
USP39-206ENST00000448971 ARRDC5A6NEK1 342 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 B9A039 149 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 H7C417 338 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 TLX2O43763 284 aaPredicted RBP12.56□□□□□ -0.4
USP39-206ENST00000448971 NDUFS7O75251 213 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 FAM157BP0CG42 384 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 ZNF35P13682 527 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 APEX1P27695 318 aaKnown RBP12.56□□□□□ -0.4
USP39-206ENST00000448971 CDKN2AP42771 156 aaKnown RBP12.56□□□□□ -0.4
USP39-206ENST00000448971 MMP16P51512 607 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.56□□□□□ -0.4
USP39-206ENST00000448971 SCRN3Q0VDG4 424 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 ENDOGQ14249 297 aaKnown RBP12.56□□□□□ -0.4
USP39-206ENST00000448971 RAB35Q15286 201 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 EFNB3Q15768 340 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 SLC35F1Q5T1Q4 408 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.56□□□□□ -0.4
USP39-206ENST00000448971 GLB1L2Q8IW92 636 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 ALDH16A1Q8IZ83 802 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 SVOPLQ8N434 492 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 OR52E2Q8NGJ4 325 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 OR8D4Q8NGM9 314 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 TEX47Q8TBZ9 253 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 TSSK2Q96PF2 358 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 NIPSNAP1Q9BPW8 284 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 TSSK6Q9BXA6 273 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 DGCR6LQ9BY27 220 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 OR2H1Q9GZK4 316 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 FN3KQ9H479 309 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 ARMC1Q9NVT9 282 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 PDP1Q9P0J1 537 aaPredicted RBP12.56□□□□□ -0.4
USP39-206ENST00000448971 CMAHPQ9Y471 501 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 FKBP7Q9Y680 259 aa12.56□□□□□ -0.4
USP39-206ENST00000448971 SVEP1Q4LDE5 3571 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms