RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ETFDHQ16134 617 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ETFRF1Q6IPR1 90 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR56B2PQ8NGI1 322 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ADAMTS16Q8TE57 1224 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RBM4BQ9BQ04 359 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF251Q9BRH9 671 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ELOVL1Q9BW60 279 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RBM4Q9BWF3 364 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 SPNS1Q9H2V7 528 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 EGLN3Q9H6Z9 239 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 PNPLA3Q9NST1 481 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 SIRT5Q9NXA8 310 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 KCNN3Q9UGI6 736 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 GPR55Q9Y2T6 319 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 MYO9AB2RTY4 2548 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 A0A0U1RQK1 487 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF320A2RRD8 509 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ALG1L2C9J202 215 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 IFNA4P05014 189 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 CDK10Q15131 360 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ANKDD1AQ495B1 522 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 MIDNQ504T8 468 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 DPY19L4Q7Z388 723 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 FITM2Q8N6M3 262 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 NPRL2Q8WTW4 380 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 IL1F10Q8WWZ1 152 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 PSMF1Q92530 271 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RRNAD1Q96FB5 475 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 CXorf36Q9H7Y0 433 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RNF6Q9Y252 685 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 IER3IP1Q9Y5U9 82 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM200CA6NKL6 621 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 PPP6CO00743 305 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 DHHO43323 396 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 CHP2O43745 196 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 HLA-HP01893 362 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 MT-ND1P03886 318 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAB1AP62820 205 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAM76BQ5HYJ3 339 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAB12Q6IQ22 244 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF321PQ8N8H1 164 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 CNRIP1Q96F85 164 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM41AQ96HV5 264 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 SEMA6AQ9H2E6 1030 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 DKK4Q9UBT3 224 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 SF3B6Q9Y3B4 125 aaKnown RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 HIVEP3Q5T1R4 2406 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 KDM4EB2RXH2 506 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 H3BNX3 289 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 FBXO45P0C2W1 286 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 FPR3P25089 353 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 PRRX1P54821 245 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOXA1P55317 472 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 PAFAH1B2P68402 229 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 FGL1Q08830 312 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 RABL3Q5HYI8 236 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMEM205Q6UW68 189 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 Q6ZS92 163 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 GTSCR1Q86UQ5 136 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 GID4Q8IVV7 300 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 GLB1L2Q8IW92 636 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 KDM8Q8N371 416 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 ACOT11Q8WXI4 607 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 MAL2Q969L2 176 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC22A4Q9H015 551 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 AKIRIN1Q9H9L7 192 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 GP6Q9HCN6 339 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 AMMECR1Q9Y4X0 333 aaPredicted RBP5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 C2orf16Q68DN1 1984 aa5.05□□□□□ -1.6
CDC42BPA-209ENST00000448940 CLDN24A6NM45 220 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CDRT15L2A8MXV6 281 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF12P17014 697 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 VDAC1P21796 283 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 EDNRAP25101 427 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 GLP1RP43220 463 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 RPL19P84098 196 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SPRED3Q2MJR0 410 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SFRP4Q6FHJ7 346 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 MZT2BQ6NZ67 158 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 TRIM46Q7Z4K8 759 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CLDN22Q8N7P3 220 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 PYURFQ96I23 114 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ARPC5LQ9BPX5 153 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ANKRA2Q9H9E1 313 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SIDT1Q9NXL6 827 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 DNAJB9Q9UBS3 223 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 PLXNA3P51805 1871 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 APOA2P02652 100 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 MAKP20794 623 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 SLC18A1P54219 525 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 F2RL1P55085 397 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 HNF4GQ14541 408 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 CNN3Q15417 329 aaKnown RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 KCNMB1Q16558 191 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 ADNP2Q6IQ32 1131 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR8J2Q8NGG1 315 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR6S1Q8NH40 331 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 NEU4Q8WWR8 484 aaPredicted RBP5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 RORBQ92753 470 aa5.04□□□□□ -1.6
CDC42BPA-209ENST00000448940 UTP4Q969X6 686 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms