RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 ZNF273Q14593 569 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CPEB2Q7Z5Q1 589 aaKnown RBP8.47□□□□□ -1.05
SMC6-207ENST00000448223 LGI3Q8N145 548 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 OR9A1PQ8NGU1 263 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 EID2BQ96D98 161 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 OPN3Q9H1Y3 402 aaPredicted RBP8.47□□□□□ -1.05
SMC6-207ENST00000448223 OR52D1Q9H346 318 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 DUSP21Q9H596 190 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 MUTYHQ9UIF7 546 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 GPR37L1O60883 481 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CLDN1O95832 211 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 HEXAP06865 529 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 FAM109BQ6ICB4 259 aaPredicted RBP8.47□□□□□ -1.05
SMC6-207ENST00000448223 TMEM107Q6UX40 140 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CCDC190Q86UF4 302 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 C19orf47Q8N9M1 422 aaKnown RBP8.47□□□□□ -1.05
SMC6-207ENST00000448223 GATSQ8NAP1 163 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 OR5L1Q8NGL2 311 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 HUS1BQ8NHY5 278 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 LHX4Q969G2 390 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 DEFB118Q96PH6 123 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CIB3Q96Q77 187 aaPredicted RBP8.47□□□□□ -1.05
SMC6-207ENST00000448223 OR2A14Q96R47 310 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 PLEKHA2Q9HB19 425 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 HRASLSQ9HDD0 168 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 MED17Q9NVC6 651 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 RNF186Q9NXI6 227 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 RNF150Q9ULK6 438 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 TCRBV16S1A1N1A0A5B0 115 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 GASTP01350 101 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CD99P14209 185 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 SP3Q02447 781 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 PLP2Q04941 152 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 RNLSQ5VYX0 342 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ZNF787Q6DD87 383 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 WDR88Q6ZMY6 472 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 TPRG1Q6ZUI0 275 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 OR52I1Q8NGK6 324 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 PPP1R1CQ8WVI7 109 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CLMPQ9H6B4 373 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 DMRT1Q9Y5R6 373 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CCDC187A0A096LP49 1063 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 A0A1B0GTQ1 180 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 OR5H15A6NDH6 313 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 A6NDN8 102 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 TMEM202A6NGA9 273 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 OR5H1A6NKK0 313 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 GABRR3A8MPY1 467 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 GFRA2O00451 464 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 SOX15O60248 233 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 NFATC1O95644 943 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ZNF728P0DKX0 622 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ECI1P42126 302 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 NPY4RP50391 375 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ZNF92Q03936 586 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 TIGITQ495A1 244 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 PLEKHS1Q5SXH7 462 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ZNF321PQ8N8H1 164 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ZNF740Q8NDX6 193 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 PLD4Q96BZ4 506 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 GPR61Q9BZJ8 451 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 WNT6Q9Y6F9 365 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 BRCA2P51587 3418 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 UPK1AO00322 258 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ACRP10323 421 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 EFNA3P52797 238 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ID2Q02363 134 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ARL16Q0P5N6 197 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 MALLQ13021 153 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ACKR1Q16570 336 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 Q499Y3 187 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 COX20Q5RI15 118 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 SAPCD1Q5SSQ6 148 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 ZNF385CQ66K41 422 aaPredicted RBP8.47□□□□□ -1.05
SMC6-207ENST00000448223 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.47□□□□□ -1.051e-6■■■■□ 21.8
SMC6-207ENST00000448223 THNSL2Q86YJ6 484 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 TGIF2LXQ8IUE1 241 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 MSRB3Q8IXL7 192 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 PRR18Q8N4B5 295 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 NANOGP1Q8N7R0 232 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 CLEC1AQ8NC01 280 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 TFGQ92734 400 aaPredicted RBP8.47□□□□□ -1.05
SMC6-207ENST00000448223 ZNF558Q96NG5 402 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 KLRF1Q9NZS2 232 aa8.47□□□□□ -1.05
SMC6-207ENST00000448223 DVL1O14640 695 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 AKR7A3O95154 331 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 PRR35P0CG20 571 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 OTX2P32243 289 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 SLC19A1P41440 591 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 CSNK1DP48730 415 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 TAS2R38P59533 333 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 STUMQ69YW2 141 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 NIPSNAP1Q9BPW8 284 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 CPPED1Q9BRF8 314 aaPredicted RBP8.46□□□□□ -1.05
SMC6-207ENST00000448223 SLC35B3Q9H1N7 401 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 MVB12BQ9H7P6 319 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 FKRPQ9H9S5 495 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 OR6C3Q9NZP0 311 aa8.46□□□□□ -1.05
SMC6-207ENST00000448223 CCDC88CQ9P219 2028 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms