RNA–Protein interactions for RNA: ENST00000444677.5

GARNL3-208, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-208	ENST00000444677	GALK2	Q01415	458 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	MEP1B	Q16820	701 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	HS3ST5	Q8IZT8	346 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	SDR9C7	Q8NEX9	313 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR10G2	Q8NGC3	310 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	C11orf40	Q8WZ69	217 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	MRPL24	Q96A35	216 aa	Known RBP	11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	NIPSNAP1	Q9BPW8	284 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	REG4	Q9BYZ8	158 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	BARX1	Q9HBU1	254 aa	Predicted RBP	11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	B9D1	Q9UPM9	204 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	TIMM10B	Q9Y5J6	103 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	CDH10	Q9Y6N8	788 aa		11.64	□□□□□ -0.55
GARNL3-208	ENST00000444677	ARID1A	O14497	2285 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	IGLV1-36	A0A0B4J1U3	117 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	C5orf49	A4QMS7	147 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR6C68	A6NDL8	312 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	BHLHE40	O14503	412 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	SOX14	O95416	240 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	F12	P00748	615 aa	Predicted RBP	11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	STOM	P27105	288 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	GUCA1A	P43080	201 aa	Predicted RBP	11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	ALDH3B1	P43353	468 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	CENPA	P49450	140 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	EFNA4	P52798	201 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	TBC1D28	Q2M2D7	210 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	ALKBH6	Q3KRA9	238 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	RASSF6	Q6ZTQ3	369 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	ADCK1	Q86TW2	530 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	JAZF1	Q86VZ6	243 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR6V1	Q8N148	313 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	NPEPL1	Q8NDH3	523 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	ICA1L	Q8NDH6	482 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR52E2	Q8NGJ4	325 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR4Q3	Q8NH05	313 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	ZNRF4	Q8WWF5	429 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	DDO	Q99489	341 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	TSSK6	Q9BXA6	273 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	TPK1	Q9H3S4	243 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	RPRD1B	Q9NQG5	326 aa	Known RBP	11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	ARMC1	Q9NVT9	282 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	DUSP13	Q9UII6	198 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	SPEF1	Q9Y4P9	236 aa		11.63	□□□□□ -0.55
GARNL3-208	ENST00000444677	VSTM5	A8MXK1	200 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	FKBP6	O75344	327 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	SNAP29	O95721	258 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	PTH	P01270	115 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	TF	P02787	698 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	LCK	P06239	509 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	BMP4	P12644	408 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	PRKACG	P22612	351 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	NOS3	P29474	1203 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	GDI2	P50395	445 aa	Known RBP	11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	UCP2	P55851	309 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	CBX1	P83916	185 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	SPATA46	Q5T0L3	261 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	CLEC9A	Q6UXN8	241 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	BIVM	Q86UB2	503 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	GLB1L2	Q8IW92	636 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	ZNF101	Q8IZC7	436 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	LINC00471	Q8N535	108 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	CYB561A3	Q8NBI2	242 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR10H5	Q8NGA6	315 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR1J2	Q8NGS2	313 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	GIPC3	Q8TF64	312 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	POM121	Q96HA1	1249 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	FEV	Q99581	238 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	DGCR6L	Q9BY27	220 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	C1orf198	Q9H425	327 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	IL20	Q9NYY1	176 aa		11.62	□□□□□ -0.55
GARNL3-208	ENST00000444677	MTOR	P42345	2549 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	SETD2	Q9BYW2	2564 aa	Predicted RBP	11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677		A0A096LNT2	108 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	C12orf71	A8MTZ7	269 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	LYNX1	G3V0Z9	82 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	GNGT2	O14610	69 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	REN	P00797	406 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	NGF	P01138	241 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	LYNX1	P0DP58	116 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	GAA	P10253	952 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	PYCR1	P32322	319 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	MPV17	P39210	176 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	PPOX	P50336	477 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	PCBD1	P61457	104 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	CARTPT	Q16568	116 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	CCDC92	Q53HC0	331 aa	Predicted RBP	11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	TMEM255A	Q5JRV8	349 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	RGS7BP	Q6MZT1	257 aa	Predicted RBP	11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	CORO6	Q6QEF8	472 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	IQCF1	Q8N6M8	205 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	PAPD5	Q8NDF8	572 aa	Known RBP	11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	OR1J1	Q8NGS3	322 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	SLC7A6	Q92536	515 aa		11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	GTF3A	Q92664	365 aa	Known RBP	11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	POP5	Q969H6	163 aa	Known RBP	11.61	□□□□□ -0.55
GARNL3-208	ENST00000444677	RHNO1	Q9BSD3	238 aa		11.61	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms