RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 SNX18Q96RF0 628 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 BTBD10Q9BSF8 475 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 IFT27Q9BW83 186 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 WNT5BQ9H1J7 359 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 MS4A5Q9H3V2 200 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 REEP1Q9H902 201 aa16.02■□□□□ 0.16
CCDC188-202ENST00000444532 EIF3KQ9UBQ5 218 aaKnown RBP16.02■□□□□ 0.16
CCDC188-202ENST00000444532 CR1P17927 2039 aa16.02■□□□□ 0.15
CCDC188-202ENST00000444532 LOC100509620A0A075B734 347 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 M0R233 179 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 NDUFS8O00217 210 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 ADRA2AP08913 450 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 ZNF250P15622 560 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 CCNOP22674 350 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 CRABP1P29762 137 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 GDI2P50395 445 aaKnown RBP16.01■□□□□ 0.15
CCDC188-202ENST00000444532 LSM6P62312 80 aaKnown RBP16.01■□□□□ 0.15
CCDC188-202ENST00000444532 GK3PQ14409 553 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 ZNF770Q6IQ21 691 aaPredicted RBP16.01■□□□□ 0.15
CCDC188-202ENST00000444532 PGM2L1Q6PCE3 622 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 DNM1P34Q6PK57 102 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 LRP11Q86VZ4 500 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 C1orf174Q8IYL3 243 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 MAPK1IP1LQ8NDC0 245 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 SYT3Q9BQG1 590 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 NUAK2Q9H093 628 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 RERGLQ9H628 205 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 EMC7Q9NPA0 242 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 REV1Q9UBZ9 1251 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 DUSP13Q9UII6 198 aa16.01■□□□□ 0.15
CCDC188-202ENST00000444532 COA3Q9Y2R0 106 aaPredicted RBP16.01■□□□□ 0.15
CCDC188-202ENST00000444532 SAMHD1Q9Y3Z3 626 aaKnown RBP16.01■□□□□ 0.15
CCDC188-202ENST00000444532 LOC390937A0A1W2PQ73 354 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 C5orf49A4QMS7 147 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 RENP00797 406 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 GASTP01350 101 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 LCKP06239 509 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 IGFBP1P08833 259 aaPredicted RBP16■□□□□ 0.15
CCDC188-202ENST00000444532 COX5BP10606 129 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 NOS3P29474 1203 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 SCRN3Q0VDG4 424 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 KCNMB1Q16558 191 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 MICAQ29983 383 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 UGT2A3Q6UWM9 527 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 JAZF1Q86VZ6 243 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 ADGRG5Q8IZF4 528 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 ZCCHC24Q8N2G6 241 aaKnown RBP16■□□□□ 0.15
CCDC188-202ENST00000444532 OR9Q2Q8NGE9 314 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 SYNPRQ8TBG9 265 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 CHID1Q9BWS9 393 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 IL20Q9NYY1 176 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 GPR160Q9UJ42 338 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 FZR1Q9UM11 496 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 CDH10Q9Y6N8 788 aa16■□□□□ 0.15
CCDC188-202ENST00000444532 CHD3Q12873 2000 aaKnown RBP16■□□□□ 0.15
CCDC188-202ENST00000444532 C2CD3Q4AC94 2353 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 A0A096LNT2 108 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 ICMTO60725 284 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 DNAJC8O75937 253 aaPredicted RBP15.99■□□□□ 0.15
CCDC188-202ENST00000444532 HIST1H1CP16403 213 aaKnown RBP15.99■□□□□ 0.15
CCDC188-202ENST00000444532 KLF3P57682 345 aaPredicted RBP15.99■□□□□ 0.15
CCDC188-202ENST00000444532 LOXL1Q08397 574 aaPredicted RBP15.99■□□□□ 0.15
CCDC188-202ENST00000444532 AQP6Q13520 282 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 MOGQ16653 247 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 ZNF774Q6NX45 483 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 LEG1Q6P5S2 330 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 RASSF6Q6ZTQ3 369 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 OR52L1Q8NGH7 329 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 OR1J1Q8NGS3 322 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 FOXN4Q96NZ1 517 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 NMNAT3Q96T66 252 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 PIMREGQ9BSJ6 248 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 OR51B6Q9H340 312 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 VNN3Q9NY84 501 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 NDRG4Q9ULP0 352 aaKnown RBP15.99■□□□□ 0.15
CCDC188-202ENST00000444532 B9D1Q9UPM9 204 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 U3KQV3 271 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 RTTNQ86VV8 2226 aa15.99■□□□□ 0.15
CCDC188-202ENST00000444532 NSD1Q96L73 2696 aaPredicted RBP15.98■□□□□ 0.15
CCDC188-202ENST00000444532 IGLV3-9A0A075B6K5 115 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 DHRS12A0PJE2 317 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 CST1P01037 141 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 TP53P04637 393 aaPredicted RBP15.98■□□□□ 0.15
CCDC188-202ENST00000444532 DAOP14920 347 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 GSTM3P21266 225 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 CBX1P83916 185 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 PPP1R8Q12972 351 aaKnown RBP15.98■□□□□ 0.15
CCDC188-202ENST00000444532 BNIP1Q12981 228 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 ARL9Q6T311 187 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 AQP11Q8NBQ7 271 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 ZNF540Q8NDQ6 660 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 OR4K13Q8NH42 304 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 CANT1Q8WVQ1 401 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 TSSK2Q96PF2 358 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 DGCR6LQ9BY27 220 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 EGLN3Q9H6Z9 239 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 ELOVL3Q9HB03 270 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 SRA1Q9HD15 236 aaKnown RBP15.98■□□□□ 0.15
CCDC188-202ENST00000444532 SLCO1C1Q9NYB5 712 aa15.98■□□□□ 0.15
CCDC188-202ENST00000444532 MYEF2Q9P2K5 600 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms