RNA–Protein interactions for RNA: ENST00000440289.6

PTPRJ-202, Transcript of protein tyrosine phosphatase, receptor type J, humanhuman

TSL 1 (best) BASIC

Gene PTPRJ, Length 3,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRJ-202ENST00000440289 DCBLD2Q96PD2 775 aa16.47■□□□□ 0.23
PTPRJ-202ENST00000440289 POTEKPQ9BYX7 375 aa16.47■□□□□ 0.23
PTPRJ-202ENST00000440289 PLEKHA1Q9HB21 404 aa16.47■□□□□ 0.23
PTPRJ-202ENST00000440289 UBQLN4Q9NRR5 601 aa16.47■□□□□ 0.23
PTPRJ-202ENST00000440289 SHPKQ9UHJ6 478 aa16.47■□□□□ 0.23
PTPRJ-202ENST00000440289 POLR1DQ9Y2S0 133 aa16.47■□□□□ 0.23
PTPRJ-202ENST00000440289 AUP1Q9Y679 476 aa16.47■□□□□ 0.23
PTPRJ-202ENST00000440289 TMEM212A6NML5 194 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 SNRPGP15A8MWD9 76 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 KRBOX1C9JBD0 128 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 PRKXP51817 358 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 EPHA4P54764 986 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 UBE2IP63279 158 aaKnown RBP16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 DHRS2Q13268 280 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 UBXN2BQ14CS0 331 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 SLC36A1Q7Z2H8 476 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 ZNF101Q8IZC7 436 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 C2CD4CQ8TF44 421 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 MARC2Q969Z3 335 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 TOE1Q96GM8 510 aaKnown RBP16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 SLC41A2Q96JW4 573 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 ZCCHC4Q9H5U6 513 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 EXOSC3Q9NQT5 275 aaKnown RBP16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 TMED7Q9Y3B3 224 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 FOXS1O43638 330 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 SULT1B1O43704 296 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 CAPZA2P47755 286 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 IL13RA1P78552 427 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 TMEM200AQ86VY9 491 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 OR52H1Q8NGJ2 320 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 MAFIPQ8WZ33 124 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 MESP1Q9BRJ9 268 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 NMNAT2Q9BZQ4 307 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 SEMA6CQ9H3T2 930 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 SEC61A2Q9H9S3 476 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 MED29Q9NX70 200 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 EPHA6Q9UF33 1036 aa16.46■□□□□ 0.23
PTPRJ-202ENST00000440289 LOC100289279A0A1B0GTE1 492 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 SRPX2O60687 465 aaPredicted RBP16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 PMP2P02689 132 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 STK11Q15831 433 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 COX15Q7KZN9 410 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 CDC20BQ86Y33 519 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 OR5D18Q8NGL1 313 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 ROBO4Q8WZ75 1007 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 C5orf34Q96MH7 638 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 PARP12Q9H0J9 701 aaKnown RBP16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 GSKIPQ9P0R6 139 aa16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 YBX2Q9Y2T7 364 aaKnown RBP16.46■□□□□ 0.22
PTPRJ-202ENST00000440289 ZNF705EA8MWA4 302 aaPredicted RBP16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 KCNJ13O60928 360 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 OR2A4O95047 310 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 FARS2O95363 451 aaKnown RBP16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 IFNA6P05013 189 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 GNB3P16520 340 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 SLC9A3R2Q15599 337 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 RNASE10Q5GAN6 216 aaKnown RBP16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 GLT8D1Q68CQ7 371 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 TMEM151BQ8IW70 566 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 OR6N1Q8NGY5 312 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 MRPS24Q96EL2 167 aaKnown RBP16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 OR2A7Q96R45 310 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 TREM1Q9NP99 234 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 SDK2Q58EX2 2172 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 ARL4DP49703 201 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 RIDAP52758 137 aaKnown RBP16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 MRPS10P82664 201 aaKnown RBP16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 ZNF117Q03924 483 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 TMEM225Q6GV28 225 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 FAM122BQ7Z309 247 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 CBLN2Q8IUK8 224 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 OR5M9Q8NGP3 310 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 DPYSL5Q9BPU6 564 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 C12orf10Q9HB07 376 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 MLXQ9UH92 298 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 ETV7Q9Y603 341 aa16.45■□□□□ 0.22
PTPRJ-202ENST00000440289 IL5P05113 134 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 ZNF823P16415 610 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 CTRB1P17538 263 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 GPR3P46089 330 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 EIF2B5Q13144 721 aaKnown RBP16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 CARD17Q5XLA6 110 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 CTRB2Q6GPI1 263 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 TRAPPC6BQ86SZ2 158 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 ATG4DQ86TL0 474 aaPredicted RBP16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 OR13C9Q8NGT0 318 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 CCDC107Q8WV48 283 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 FGGYQ96C11 551 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 SEH1LQ96EE3 360 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 SELENOIQ9C0D9 397 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 SHARPINQ9H0F6 387 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 SLC6A15Q9H2J7 730 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 PCDHB16Q9NRJ7 776 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 HIF3AQ9Y2N7 669 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 TNFSF14O43557 240 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 HTR3BO95264 441 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 SEMA4FO95754 770 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 ATPAF1Q5TC12 328 aaPredicted RBP16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 SLC18B1Q6NT16 456 aa16.44■□□□□ 0.22
PTPRJ-202ENST00000440289 LINC00114Q6XXX2 140 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms