RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 PRTFDC1Q9NRG1 225 aa13.75□□□□□ -0.21
CDC42EP4-202ENST00000439510 FAM25EA8MYX2 175 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 PNPP00491 289 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 PLATP00750 562 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 FSTP19883 344 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 COL9A1P20849 921 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 CCR4P51679 360 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 LUMP51884 338 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 BTG2P78543 158 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 DEFA5Q01523 94 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 FLI1Q01543 452 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 PRTGQ2VWP7 1150 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 VWA2Q5GFL6 755 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 MED25Q71SY5 747 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 LINC00518Q8N0U6 118 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 SLC22A13Q9Y226 551 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 PRELID3BQ9Y3B1 194 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 KLF2Q9Y5W3 355 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 A0A0A6YYH2 397 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 A0A1W2PPC1 479 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 RNF222A6NCQ9 220 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 A6NJ64 397 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 TMEM200CA6NKL6 621 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 SIGLEC5O15389 551 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 ST6GAL1P15907 406 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 HLA-GP17693 338 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 IGFBP3P17936 291 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 HTR2CP28335 458 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 CD34P28906 385 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 ROM1Q03395 351 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 SIGLEC14Q08ET2 396 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 OR13C8Q8NGS7 320 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 PHOSPHO1Q8TCT1 267 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 ASB5Q8WWX0 329 aa13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 VRK1Q99986 396 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 PRMT8Q9NR22 394 aaPredicted RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 PURGQ9UJV8 347 aaKnown RBP13.74□□□□□ -0.21
CDC42EP4-202ENST00000439510 LDLRAD4O15165 306 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ZNF264O43296 627 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ALOX12BO75342 701 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 CYB5AP00167 134 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 HNRNPA2B1P22626 353 aaKnown RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 FNTBP49356 437 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 CENPAP49450 140 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ELP2Q6IA86 826 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 UQCC3Q6UW78 93 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 OR2W3Q7Z3T1 314 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 SFTPA2Q8IWL1 248 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 PIGMQ9H3S5 423 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 SEMA6CQ9H3T2 930 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 UBE2ZQ9H832 354 aaPredicted RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 FBXO4Q9UKT5 387 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 DHDHQ9UQ10 334 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 CACNA1CQ13936 2221 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 CACNA1IQ9P0X4 2223 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ZNF736B4DX44 427 aaPredicted RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 H2AFB1P0C5Y9 115 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 PPIAP62937 165 aaKnown RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ERV3-1Q14264 604 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 LIN54Q6MZP7 749 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ACOT7LQ6ZUV0 252 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 SLC35D2Q76EJ3 337 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ZNF627Q7L945 461 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 OOSP2Q86WS3 158 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ZNF75AQ96N20 296 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 FAM117AQ9C073 453 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ADAM19Q9H013 955 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 SLC2A8Q9NY64 477 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 CKLFQ9UBR5 152 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 PRODH2Q9UF12 536 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ZNF175Q9Y473 711 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 TMEM131Q92545 1883 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 OR2W5A6NFC9 320 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 CLDN4O14493 209 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 HPGDP15428 266 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 MAOAP21397 527 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 TACR3P29371 465 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 PAN3Q58A45 887 aaKnown RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 IGSF11Q5DX21 431 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 GLYATL3Q5SZD4 288 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 SLC18B1Q6NT16 456 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 NDUFAF7Q7L592 441 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ADGRE4PQ86SQ3 457 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 CCDC36Q8IYA8 594 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 BPIFB2Q8N4F0 458 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 GPBAR1Q8TDU6 330 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ADAMTS18Q8TE60 1221 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ZNF587Q96SQ5 575 aaPredicted RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 ELF4Q99607 663 aaPredicted RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 NKX3-1Q99801 234 aaPredicted RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 COMMD9Q9P000 198 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 B9D1Q9UPM9 204 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 KCNK7Q9Y2U2 307 aa13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 MRPS18BQ9Y676 258 aaKnown RBP13.73□□□□□ -0.21
CDC42EP4-202ENST00000439510 SCDO00767 359 aa13.72□□□□□ -0.21
CDC42EP4-202ENST00000439510 SIGLEC6O43699 453 aa13.72□□□□□ -0.21
CDC42EP4-202ENST00000439510 IL33O95760 270 aa13.72□□□□□ -0.21
CDC42EP4-202ENST00000439510 HLA-AP01891 365 aaKnown RBP13.72□□□□□ -0.21
CDC42EP4-202ENST00000439510 SKP1P63208 163 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms