RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 ARHGEF17Q96PE2 2063 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 FAM171A2A8MVW0 826 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 RAB3DO95716 219 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 CFIP05156 583 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 RPL4P36578 427 aaKnown RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 SSBP1Q04837 148 aaKnown RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 DHRS2Q13268 280 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 FZD2Q14332 565 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 INPP5JQ15735 1006 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 HLA-BQ31612 363 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 FIGNL1Q6PIW4 674 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 FAM220AQ7Z4H9 259 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 CCDC74AQ96AQ1 378 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 SLC25A21Q9BQT8 299 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 POTEKPQ9BYX7 375 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 MYOZ1Q9NP98 299 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 ADAP2Q9NPF8 381 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 FRRS1LQ9P0K9 344 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 SUSD2Q9UGT4 822 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 CACNA1AO00555 2505 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 SCN2AQ99250 2005 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 SPTBP11277 2137 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 M0QYG6 137 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 SRPX2O60687 465 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 TACSTD2P09758 323 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 CD79AP11912 226 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 ABOP16442 354 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 NFYBP25208 207 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 RAB28P51157 221 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 TAS2R19P59542 299 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 NR0B2Q15466 257 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 TRMT12Q53H54 448 aaKnown RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 ATPAF1Q5TC12 328 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 RBMS3Q6XE24 437 aaKnown RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 COX18Q8N8Q8 333 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 GPX8Q8TED1 209 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 COX14Q96I36 57 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 INSM2Q96T92 566 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 ZNF426Q9BUY5 554 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 SEC11CQ9BY50 192 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 KCNK15Q9H427 330 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 TMEM231Q9H6L2 316 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 TINAGQ9UJW2 476 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 CELSR3Q9NYQ7 3312 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 A0A1B0GTH9 108 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 UPK3AO75631 287 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 S100A8P05109 93 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 RBM34P42696 430 aaKnown RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 TSFMP43897 325 aaKnown RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 POU3F4P49335 361 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 ACTBP60709 375 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 RAB5BP61020 215 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 ACTG1P63261 375 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 HABP2Q14520 560 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 TMEM205Q6UW68 189 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 RABEPKQ7Z6M1 372 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 INO80EQ8NBZ0 244 aaPredicted RBP7.73□□□□□ -1.17
HPS4-206ENST00000439453 ZNF417Q8TAU3 575 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 ELP5Q8TE02 316 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 NMNAT2Q9BZQ4 307 aa7.73□□□□□ -1.17
HPS4-206ENST00000439453 TRBV5-7A0A0A0MS05 114 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 NUDT19A8MXV4 375 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 H3BSH0 61 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 YKT6O15498 198 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 RDH16O75452 317 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 GLCEO94923 617 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 AMY2AP04746 511 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 CAPZA1P52907 286 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 RSPO4Q2I0M5 234 aaPredicted RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 Q6ZSR6 202 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 GALNT16Q8N428 558 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ZNF511Q8NB15 262 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 TMEM229BQ8NBD8 167 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 OR5AP2Q8NGF4 316 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 OR4A4PQ8NGN8 299 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ZBTB8AQ96BR9 441 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 RASD2Q96D21 266 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 TINAGL1Q9GZM7 467 aaPredicted RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 MRM2Q9UI43 246 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 KLHDC2Q9Y2U9 406 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 PCNX2A6NKB5 2137 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 SPTY2D1-AS1A0A0U1RR47 76 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 TMEM72A0PK05 275 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 C4orf47A7E2U8 309 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 SCAMP1O15126 338 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 THEGLP0DJG4 465 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 HAAOP46952 286 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ECH1Q13011 328 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 KCNAB1Q14722 419 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 PEA15Q15121 130 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ALG10BQ5I7T1 473 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 LINC01590Q5TEZ4 76 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 PRAMEF17Q5VTA0 474 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 ZNF704Q6ZNC4 412 aaPredicted RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 MFSD9Q8NBP5 474 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 OR2L8Q8NGY9 312 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 OR10AC1Q8NH08 325 aa7.72□□□□□ -1.17
HPS4-206ENST00000439453 RBM18Q96H35 190 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 ADAD1Q96M93 576 aaKnown RBP7.72□□□□□ -1.17
HPS4-206ENST00000439453 ALG12Q9BV10 488 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms