RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 SPRY3O43610 288 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 PLPP2O43688 288 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 TIMM8AO60220 97 aaPredicted RBP6.61□□□□□ -1.35
VPS50-204ENST00000438395 TRMUO75648 421 aaKnown RBP6.61□□□□□ -1.35
VPS50-204ENST00000438395 OR5F1O95221 314 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 SLC2A10O95528 541 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 IGHV3-13P01766 116 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 IGHV2-5P01817 119 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 ASAH2BP0C7U1 165 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 THRBP10828 461 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 FUT1P19526 365 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 GSTM3P21266 225 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 CFPP27918 469 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 CDAP32320 146 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 LIPAP38571 399 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 CRYBB2P43320 205 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 ARHGDIAP52565 204 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 UGT2B15P54855 530 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 HILS1P60008 231 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 ERVS71-1P61550 626 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 LMO4P61968 165 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 PPP1CBP62140 327 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 CDK5R2Q13319 367 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 SELPLGQ14242 412 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 MAPRE2Q15555 327 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 LRRC23Q53EV4 343 aaPredicted RBP6.61□□□□□ -1.35
VPS50-204ENST00000438395 ALG10Q5BKT4 473 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 C10orf128Q5T292 105 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 FAM205BPQ63HN1 556 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 ERICH5Q6P6B1 374 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 USP43Q70EL4 1123 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 C1QL2Q7Z5L3 287 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 SEMA6DQ8NFY4 1073 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 PFN4Q8NHR9 129 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 ABHD4Q8TB40 342 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 FNDC8Q8TC99 324 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 TMEM255BQ8WV15 326 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 IPCEF1Q8WWN9 437 aaPredicted RBP6.61□□□□□ -1.35
VPS50-204ENST00000438395 STON2Q8WXE9 905 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 LZICQ8WZA0 190 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 TSPAN32Q96QS1 320 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 RBP7Q96R05 134 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 DIRC2Q96SL1 478 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 ZNF426Q9BUY5 554 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 ALG12Q9BV10 488 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 RSPO3Q9BXY4 272 aaPredicted RBP6.61□□□□□ -1.35
VPS50-204ENST00000438395 ELOVL3Q9HB03 270 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 WIPI2Q9Y4P8 454 aa6.61□□□□□ -1.35
VPS50-204ENST00000438395 HTR3EA5X5Y0 456 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 A6NIZ1 184 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 NPIPB13A6NJU9 1138 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 BBIP1A8MTZ0 92 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 NPIPB4C9JG80 1138 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 XKRYO14609 159 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 SPRY1O43609 319 aaPredicted RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 EIF4EBP3O60516 100 aaPredicted RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 SHOX2O60902 331 aaPredicted RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 LYPD3O95274 346 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 ABHD16AO95870 558 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 GSTP1P09211 210 aaKnown RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 TROVE2P10155 538 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS50-204ENST00000438395 ZNF32P17041 273 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 TNFRSF1BP20333 461 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 MAKP20794 623 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 MSR1P21757 451 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 RPL4P36578 427 aaKnown RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 RAP1BP61224 184 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 RAP1AP62834 184 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 ERVK-25P63136 954 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 LCN2P80188 198 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 TNFAIP6P98066 277 aaPredicted RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 FMODQ06828 376 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 ST3GAL3Q11203 375 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 ARMCX4Q5H9R4 360 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 RABL3Q5HYI8 236 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 THEM4Q5T1C6 240 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 METTL21CQ5VZV1 264 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 CCDC80Q76M96 950 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 SPICQ8N5J4 248 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 NPEPL1Q8NDH3 523 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 OR8J3Q8NGG0 315 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 OR4D11Q8NGI4 311 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 AKR7LQ8NHP1 331 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 MOSPD2Q8NHP6 518 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 SGMS2Q8NHU3 365 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 KLF14Q8TD94 323 aaPredicted RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 FAM216AQ8WUB2 273 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 TPD52L3Q96J77 140 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 MAGEB18Q96M61 343 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 SLC6A7Q99884 636 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 MRPL13Q9BYD1 178 aaKnown RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 PLA2G12AQ9BZM1 189 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 OR2H1Q9GZK4 316 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 TXNIPQ9H3M7 391 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 MEPEQ9NQ76 525 aaPredicted RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
VPS50-204ENST00000438395 RIMS3Q9UJD0 308 aa6.6□□□□□ -1.35
VPS50-204ENST00000438395 ZDHHC8Q9ULC8 765 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms