RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 MS4A3Q96HJ5 214 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 WFDC6Q9BQY6 131 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF556Q9HAH1 456 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 MED29Q9NX70 200 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 ENOPH1Q9UHY7 261 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF346Q9UL40 294 aaKnown RBP12.02□□□□□ -0.49
LINC01088-201ENST00000437737 RCE1Q9Y256 329 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 ORC6Q9Y5N6 252 aa12.02□□□□□ -0.49
LINC01088-201ENST00000437737 A0A0B4J2E0 115 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 A0A1B0GX12 115 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 HLA-HP01893 362 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 PRTN3P24158 256 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 PEX2P28328 305 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 MAGEB1P43366 347 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 IL13RA1P78552 427 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 HOXC5Q00444 222 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 PIGFQ07326 219 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 NKPD1Q17RQ9 610 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 RFX4Q33E94 735 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 ALG10BQ5I7T1 473 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 LPCAT4Q643R3 524 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 OR4C15Q8NGM1 316 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 OR52J3Q8NH60 311 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 NRG4Q8WWG1 115 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 ACOT11Q8WXI4 607 aaPredicted RBP12.01□□□□□ -0.49
LINC01088-201ENST00000437737 SLC25A36Q96CQ1 311 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF837Q96EG3 531 aaPredicted RBP12.01□□□□□ -0.49
LINC01088-201ENST00000437737 RDH12Q96NR8 316 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 GABARAPL1Q9H0R8 117 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 ZMAT3Q9HA38 289 aaKnown RBP12.01□□□□□ -0.49
LINC01088-201ENST00000437737 USE1Q9NZ43 259 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 PDP1Q9P0J1 537 aaPredicted RBP12.01□□□□□ -0.49
LINC01088-201ENST00000437737 KIF17Q9P2E2 1029 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 RHCGQ9UBD6 479 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 SLC7A7Q9UM01 511 aa12.01□□□□□ -0.49
LINC01088-201ENST00000437737 PRKDCP78527 4128 aaKnown RBP12.01□□□□□ -0.49
LINC01088-201ENST00000437737 ARHGAP32A7KAX9 2087 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 A0A1B0GWA3 101 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 DNAJC9-AS1A6NH13 148 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 POM121CA8CG34 1229 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF99A8MXY4 864 aaPredicted RBP12□□□□□ -0.49
LINC01088-201ENST00000437737 AHSA1O95433 338 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF35P13682 527 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 GATA3P23771 443 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 HTR2AP28223 471 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 RAD52P43351 418 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 ALDH3A2P51648 485 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 RAD23AP54725 363 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 C1DQ13901 141 aaKnown RBP12□□□□□ -0.49
LINC01088-201ENST00000437737 TTC33Q6PID6 262 aaPredicted RBP12□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF730Q6ZMV8 503 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 CBR4Q8N4T8 237 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 ATG16L2Q8NAA4 619 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 OR10G2Q8NGC3 310 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 SLC19A3Q9BZV2 496 aa12□□□□□ -0.49
LINC01088-201ENST00000437737 A0A087WUJ7 227 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 M0R3G1 203 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 AKAP8O43823 692 aaKnown RBP11.99□□□□□ -0.49
LINC01088-201ENST00000437737 OR10H3O60404 316 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 FSHBP01225 129 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 IGHV2-5P01817 119 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF14P17017 642 aaPredicted RBP11.99□□□□□ -0.49
LINC01088-201ENST00000437737 ZNF26P17031 533 aaPredicted RBP11.99□□□□□ -0.49
LINC01088-201ENST00000437737 CCL8P80075 99 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 TEKQ02763 1124 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 COX10Q12887 443 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 BAMBIQ13145 260 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 C5orf46Q6UWT4 87 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 MBOAT2Q6ZWT7 520 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 DOK3Q7L591 496 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 SLC7A13Q8TCU3 470 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 TMEM239Q8WW34 195 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 DVL3Q92997 716 aaPredicted RBP11.99□□□□□ -0.49
LINC01088-201ENST00000437737 FUZQ9BT04 418 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 VNN3Q9NY84 501 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 B3GNT2Q9NY97 397 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 OPN4Q9UHM6 478 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 GPR160Q9UJ42 338 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 TMEM5Q9Y2B1 443 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 MED31Q9Y3C7 131 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 CMYA5Q8N3K9 4069 aa11.99□□□□□ -0.49
LINC01088-201ENST00000437737 VWFP04275 2813 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 A0A087WUU8 490 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 TRBV4-1A0A0J9YWV2 114 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 C17orf100A8MU93 164 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 CLDN25C9JDP6 229 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 SOCS2O14508 198 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 EI24O14681 340 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 TPD52L2O43399 206 aaKnown RBP11.98□□□□□ -0.49
LINC01088-201ENST00000437737 RAB36O95755 333 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 IGF2P01344 180 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 ALPLP05186 524 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 GSTM3P21266 225 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 RPS5P46782 204 aaKnown RBP11.98□□□□□ -0.49
LINC01088-201ENST00000437737 PPP1R8Q12972 351 aaKnown RBP11.98□□□□□ -0.49
LINC01088-201ENST00000437737 TAF11Q15544 211 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 ARMCX4Q5H9R4 360 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 CARD17Q5XLA6 110 aa11.98□□□□□ -0.49
LINC01088-201ENST00000437737 RGS7BPQ6MZT1 257 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms