RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 SDK2Q58EX2 2172 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 LYRM1O43325 122 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 FREM3P0C091 2139 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 CALCBP10092 127 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 LAP3P28838 519 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 MDGA2Q7Z553 956 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 AKAP14Q86UN6 197 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 ABHD1Q96SE0 405 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 PIGQQ9BRB3 760 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 FOXJ2Q9P0K8 574 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 CAMK2AQ9UQM7 478 aa22.91■■□□□ 1.26
CPNE1-216ENST00000437340 OR2M5A3KFT3 312 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 ZNF814B7Z6K7 855 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 SRSF10O75494 262 aaKnown RBP22.9■■□□□ 1.26
CPNE1-216ENST00000437340 MMP15P51511 669 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 ACER2Q5QJU3 275 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 HES5Q5TA89 166 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 DUSP18Q8NEJ0 188 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 OR51A4Q8NGJ6 313 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 OR10AC1Q8NH08 325 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 RNF133Q8WVZ7 376 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 C11orf40Q8WZ69 217 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 TRIM63Q969Q1 353 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 JSRP1Q96MG2 331 aaPredicted RBP22.9■■□□□ 1.26
CPNE1-216ENST00000437340 HDHD2Q9H0R4 259 aa22.9■■□□□ 1.26
CPNE1-216ENST00000437340 VAMP5O95183 116 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 ADRA2CP18825 462 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 KIR2DL3P43628 341 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 RAC1P63000 192 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 CD300CQ08708 224 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 HIST3H3Q16695 136 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 TSEN15Q8WW01 171 aaKnown RBP22.89■■□□□ 1.26
CPNE1-216ENST00000437340 CYB5R1Q9UHQ9 305 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 SLC22A13Q9Y226 551 aa22.89■■□□□ 1.26
CPNE1-216ENST00000437340 EML6Q6ZMW3 1958 aa22.89■■□□□ 1.25
CPNE1-216ENST00000437340 G3V3Y1 287 aa22.89■■□□□ 1.25
CPNE1-216ENST00000437340 NR2C1P13056 603 aa22.89■■□□□ 1.25
CPNE1-216ENST00000437340 CFPP27918 469 aa22.89■■□□□ 1.25
CPNE1-216ENST00000437340 SRD5A2P31213 254 aa22.89■■□□□ 1.25
CPNE1-216ENST00000437340 SCAND1P57086 179 aa22.89■■□□□ 1.25
CPNE1-216ENST00000437340 MFGE8Q08431 387 aaPredicted RBP22.89■■□□□ 1.25
CPNE1-216ENST00000437340 CAMK2DQ13557 499 aa22.89■■□□□ 1.25
CPNE1-216ENST00000437340 KNTC1P50748 2209 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 CFAP54Q96N23 3096 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 GJE1A6NN92 205 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 ZNF726A6NNF4 738 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 CTDSPLO15194 276 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 TLX3O43711 291 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-216ENST00000437340 WNT11O96014 354 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 DCTDP32321 178 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 CSNK2A1P68400 391 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-216ENST00000437340 ODF4Q2M2E3 257 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 B3GNTL1Q67FW5 361 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-216ENST00000437340 ZNF57Q68EA5 555 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-216ENST00000437340 SLC25A47Q6Q0C1 308 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 LINC00346Q8IVM7 164 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 NAA11Q9BSU3 229 aaPredicted RBP22.88■■□□□ 1.25
CPNE1-216ENST00000437340 MMP28Q9H239 520 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 LIN7BQ9HAP6 207 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 GTF2A1LQ9UNN4 478 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 ETV7Q9Y603 341 aa22.88■■□□□ 1.25
CPNE1-216ENST00000437340 GVINP1Q7Z2Y8 2422 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 TRAV8-7A0A075B6U6 113 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 A0A1B0GVC2 190 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 A6NIN4 97 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 ANXA2P2A6NMY6 339 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 TTLL8A6PVC2 850 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 TERTO14746 1132 aaKnown RBP22.87■■□□□ 1.25
CPNE1-216ENST00000437340 ANXA2P07355 339 aaKnown RBP22.87■■□□□ 1.25
CPNE1-216ENST00000437340 FAM157BP0CG42 384 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 POU4F3Q15319 338 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 JMJD6Q6NYC1 403 aaPredicted RBP22.87■■□□□ 1.25
CPNE1-216ENST00000437340 PLET1Q6UQ28 207 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 ABCG5Q9H222 651 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 RNF121Q9H920 327 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 PTPRBP23467 1997 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 CACNA1CQ13936 2221 aa22.87■■□□□ 1.25
CPNE1-216ENST00000437340 RAMP1O60894 148 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 ISG15P05161 165 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 CSRP1P21291 193 aaKnown RBP22.86■■□□□ 1.25
CPNE1-216ENST00000437340 DLSTP36957 453 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 TPTEP56180 551 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 RAB40AQ8WXH6 277 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 C1orf198Q9H425 327 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 CLEC4AQ9UMR7 237 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 DHDHQ9UQ10 334 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 FAM186AA6NE01 2351 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 FAM240BA0A1B0GVZ2 78 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 MEIOCA2RUB1 952 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 TM4SF5O14894 197 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 DNPH1O43598 174 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 GSTZ1O43708 216 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-216ENST00000437340 CD2P06729 351 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 H2BFMP0C1H6 154 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 DNASE1L1P49184 302 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 CYB561P49447 251 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 MMP16P51512 607 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 ZNF704Q6ZNC4 412 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-216ENST00000437340 HIST2H2ABQ8IUE6 130 aaPredicted RBP22.86■■□□□ 1.25
CPNE1-216ENST00000437340 CMTM4Q8IZR5 234 aa22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms