RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 HTR3EA5X5Y0 456 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 A6NIZ1 184 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 NPIPB13A6NJU9 1138 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 BBIP1A8MTZ0 92 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 NPIPB4C9JG80 1138 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 XKRYO14609 159 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 SPRY1O43609 319 aaPredicted RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 SHOX2O60902 331 aaPredicted RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 LYPD3O95274 346 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 ABHD16AO95870 558 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 H2AFB1P0C5Y9 115 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 H2AFB2P0C5Z0 115 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 TROVE2P10155 538 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS50-203ENST00000436177 ZNF32P17041 273 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 TNFRSF1BP20333 461 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 MAKP20794 623 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 MSR1P21757 451 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 RPL4P36578 427 aaKnown RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 RAP1BP61224 184 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 RAP1AP62834 184 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 ERVK-25P63136 954 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 LCN2P80188 198 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 TNFAIP6P98066 277 aaPredicted RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 FMODQ06828 376 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 ST3GAL3Q11203 375 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 PIN1Q13526 163 aaPredicted RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 ARMCX4Q5H9R4 360 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 RABL3Q5HYI8 236 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 THEM4Q5T1C6 240 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 METTL21CQ5VZV1 264 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 CCDC80Q76M96 950 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 SPICQ8N5J4 248 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 NPEPL1Q8NDH3 523 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 OR8J3Q8NGG0 315 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 OR4D11Q8NGI4 311 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 AKR7LQ8NHP1 331 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 MOSPD2Q8NHP6 518 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 SGMS2Q8NHU3 365 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 KLF14Q8TD94 323 aaPredicted RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 FAM216AQ8WUB2 273 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 TPD52L3Q96J77 140 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 MAGEB18Q96M61 343 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 SLC6A7Q99884 636 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 MRPL13Q9BYD1 178 aaKnown RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 PLA2G12AQ9BZM1 189 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 OR2H1Q9GZK4 316 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 TXNIPQ9H3M7 391 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 MEPEQ9NQ76 525 aaPredicted RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 RIMS3Q9UJD0 308 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 ZDHHC8Q9ULC8 765 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 NDRG4Q9ULP0 352 aaKnown RBP6.6□□□□□ -1.35
VPS50-203ENST00000436177 TIMM10BQ9Y5J6 103 aa6.6□□□□□ -1.35
VPS50-203ENST00000436177 CUBNO60494 3623 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 YLPM1P49750 1951 aaKnown RBP6.59□□□□□ -1.35
VPS50-203ENST00000436177 ZSCAN5BA6NJL1 495 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 MRASO14807 208 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 SURF4O15260 269 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 FOXH1O75593 365 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 IGF2P01344 180 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 IGHV1-46P01743 117 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 THY1P04216 161 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 IFNW1P05000 195 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 CST2P09228 141 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 MMP7P09237 267 aaPredicted RBP6.59□□□□□ -1.35
VPS50-203ENST00000436177 IFI30P13284 250 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 ADRA2CP18825 462 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 LAP3P28838 519 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 MPV17P39210 176 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 OR1E2P47887 323 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 HTR5AP47898 357 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 RPL27P61353 136 aaKnown RBP6.59□□□□□ -1.35
VPS50-203ENST00000436177 SCRN3Q0VDG4 424 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 HIST3H3Q16695 136 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 CYBRD1Q53TN4 286 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 TTMPQ5BVD1 217 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 ARMC4Q5T2S8 1044 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 FAM27BQ5VT28 67 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 MBNL2Q5VZF2 373 aaKnown RBP6.59□□□□□ -1.35
VPS50-203ENST00000436177 NANOGP8Q6NSW7 305 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 RFPL4BQ6ZWI9 263 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 RRM2BQ7LG56 351 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 OAFQ86UD1 273 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 NKAIN4Q8IVV8 208 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 ZNF101Q8IZC7 436 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 KLHL36Q8N4N3 616 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 PCYOX1LQ8NBM8 494 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 SLC25A40Q8TBP6 338 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 GTF3AQ92664 365 aaKnown RBP6.59□□□□□ -1.35
VPS50-203ENST00000436177 LRRC58Q96CX6 371 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 BPIFA2Q96DR5 249 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 POM121L2Q96KW2 1035 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 PRRC1Q96M27 445 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 SEPHS2Q99611 448 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 KRTAP4-12Q9BQ66 201 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 PRSS27Q9BQR3 290 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 FNDC11Q9BVV2 318 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 OR2J1Q9GZK6 312 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 G6PC2Q9NQR9 355 aa6.59□□□□□ -1.35
VPS50-203ENST00000436177 C20orf141Q9NUB4 165 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms